We are interested in investigating the mechanistic enzymology and regulatory mechanisms for the interconversion of PRPP to AIR, the first five steps in the purine biosynthetic pathway. We recently isolated a new trifunctional protein from chicken liver which possesses GAR synthetase, GAR transformylase and AIR synthetase activities, the second, third and fifth activities in the pathway. We propose to study the mechanism of these synthetases and hope to define their domains within the polypeptide. We hope to examine the possibility that PRA aminotransferase, 1st enzyme, and FGAM synthetase, 4th enzyme, in this pathway are physically linked, perhaps through their glutamine binding domains. Antibodies prepared to the purified amidotransferase and the cDNA isolated from chicken liver cDNA library will be used as probes to determine whether these activities are part of multidomained protein. The stability of three of the intermediates generated in the enzymatic conversion PRPP to AIR will be examined as a potential explanation for the existence of multidomained protein which may exist in multifunctional enzyme complexes. The mechanistic enzymology of each of the five activities will be investigated, and based on these results design of mechanism based inhibitors will be undertaken. New potent inhibitors of purine biosynthesis may be of use as chemotherapeutic agents and as aids in the investigation of the regulatory mechanisms involved in this pathway.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
7R01GM032191-06
Application #
3280809
Study Section
Physical Biochemistry Study Section (PB)
Project Start
1987-09-01
Project End
1991-06-30
Budget Start
1987-09-01
Budget End
1988-06-30
Support Year
6
Fiscal Year
1987
Total Cost
Indirect Cost
Name
Massachusetts Institute of Technology
Department
Type
Schools of Arts and Sciences
DUNS #
City
Cambridge
State
MA
Country
United States
Zip Code
02139
Morar, Mariya; Hoskins, Aaron A; Stubbe, JoAnne et al. (2008) Formylglycinamide ribonucleotide amidotransferase from Thermotoga maritima: structural insights into complex formation. Biochemistry 47:7816-30
Hoskins, Aaron A; Morar, Mariya; Kappock, T Joseph et al. (2007) N5-CAIR mutase: role of a CO2 binding site and substrate movement in catalysis. Biochemistry 46:2842-55
Anand, Ruchi; Hoskins, Aaron A; Stubbe, JoAnne et al. (2004) Domain organization of Salmonella typhimurium formylglycinamide ribonucleotide amidotransferase revealed by X-ray crystallography. Biochemistry 43:10328-42
Anand, Ruchi; Hoskins, Aaron A; Bennett, Eric M et al. (2004) A model for the Bacillus subtilis formylglycinamide ribonucleotide amidotransferase multiprotein complex. Biochemistry 43:10343-52
Hoskins, Aaron A; Anand, Ruchi; Ealick, Steven E et al. (2004) The formylglycinamide ribonucleotide amidotransferase complex from Bacillus subtilis: metabolite-mediated complex formation. Biochemistry 43:10314-27
Zilles, J L; Kappock, T J; Stubbe, J et al. (2001) Altered pathway routing in a class of Salmonella enterica serovar Typhimurium mutants defective in aminoimidazole ribonucleotide synthetase. J Bacteriol 183:2234-40
Kappock, T J; Ealick, S E; Stubbe, J (2000) Modular evolution of the purine biosynthetic pathway. Curr Opin Chem Biol 4:567-72
Li, C; Kappock, T J; Stubbe, J et al. (1999) X-ray crystal structure of aminoimidazole ribonucleotide synthetase (PurM), from the Escherichia coli purine biosynthetic pathway at 2.5 A resolution. Structure 7:1155-66
Mueller, E J; Oh, S; Kavalerchik, E et al. (1999) Investigation of the ATP binding site of Escherichia coli aminoimidazole ribonucleotide synthetase using affinity labeling and site-directed mutagenesis. Biochemistry 38:9831-9
Mathews, I I; Kappock, T J; Stubbe, J et al. (1999) Crystal structure of Escherichia coli PurE, an unusual mutase in the purine biosynthetic pathway. Structure 7:1395-406

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