The long-term objective of the research proposed here is to understand the molecular mechanisms of homologous genetic recombination. These objectives are approached genetically by studying mutant organisms altered in recombination and biochemically by studying the enzymes promoting recombination and the reactions of DNA during recombination. The research is focused on meiotic recombination in the fission yeast Schizosaccharomyces pombe and on the RecBCD pathway of recombination in the bacterium Escherichia coli. Recombination in both of these situations is associated with the formation and repair of DNA double-strand breaks.
Specific aims of the research in S. pombe are to 1) analyze meiotic DNA breaks and determine their role in recombination, 2) isolate and analyze S. pombe mutants altered in the late steps of recombination, and 3) assess the role of recombination in meiotic chromosome segregation.
The specific aim of the research in E. coli is to elucidate the mechanism of DNA unwinding from a double-strand end by RecBCD enzyme, a traveling recombination machine. Recombination is important for generating diversity at both the organismal and cellular levels and for the repair of DNA double-strand breaks. Aberrancies of recombination generate chromosomal rearrangements, such as deletions, translocations, and deficiencies. These rearrangements are associated with, and may be a cause of, birth defects and cancers. Understanding the molecular mechanisms of recombination is important in determining the causes of these diseases and possibly preventing them.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM032194-20
Application #
6519102
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Program Officer
Anderson, Richard A
Project Start
1983-03-01
Project End
2005-06-30
Budget Start
2002-07-01
Budget End
2003-06-30
Support Year
20
Fiscal Year
2002
Total Cost
$343,080
Indirect Cost
Name
Fred Hutchinson Cancer Research Center
Department
Type
DUNS #
075524595
City
Seattle
State
WA
Country
United States
Zip Code
98109
Fowler, Kyle R; Hyppa, Randy W; Cromie, Gareth A et al. (2018) Physical basis for long-distance communication along meiotic chromosomes. Proc Natl Acad Sci U S A 115:E9333-E9342
Nambiar, Mridula; Smith, Gerald R (2018) Pericentromere-Specific Cohesin Complex Prevents Meiotic Pericentric DNA Double-Strand Breaks and Lethal Crossovers. Mol Cell 71:540-553.e4
Ma, Lijuan; Fowler, Kyle R; Martín-Castellanos, Cristina et al. (2017) Functional organization of protein determinants of meiotic DNA break hotspots. Sci Rep 7:1393
Nambiar, Mridula; Smith, Gerald R (2016) Repression of harmful meiotic recombination in centromeric regions. Semin Cell Dev Biol 54:188-97
Polakova, Silvia; Molnarova, Lucia; Hyppa, Randy W et al. (2016) Dbl2 Regulates Rad51 and DNA Joint Molecule Metabolism to Ensure Proper Meiotic Chromosome Segregation. PLoS Genet 12:e1006102
Ma, Lijuan; Milman, Neta; Nambiar, Mridula et al. (2015) Two separable functions of Ctp1 in the early steps of meiotic DNA double-strand break repair. Nucleic Acids Res 43:7349-59
Phadnis, Naina; Cipak, Lubos; Polakova, Silvia et al. (2015) Casein Kinase 1 and Phosphorylation of Cohesin Subunit Rec11 (SA3) Promote Meiotic Recombination through Linear Element Formation. PLoS Genet 11:e1005225
Cipak, Lubos; Polakova, Silvia; Hyppa, Randy W et al. (2014) Synchronized fission yeast meiosis using an ATP analog-sensitive Pat1 protein kinase. Nat Protoc 9:223-31
Fowler, Kyle R; Sasaki, Mariko; Milman, Neta et al. (2014) Evolutionarily diverse determinants of meiotic DNA break and recombination landscapes across the genome. Genome Res 24:1650-64
Hyppa, Randy W; Fowler, Kyle R; Cipak, Lubos et al. (2014) DNA intermediates of meiotic recombination in synchronous S. pombe at optimal temperature. Nucleic Acids Res 42:359-69

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