Our goal is to identify and characterize functions present in the terminus region of the Escherichia coli chromosome that are important for coordinating chromosome replication with cell division. Particular emphasis will be placed on characterization of the sites within the terminus region which inhibit replication forks. Specifically, it is proposed to: 1) Locate the exact sites where clockwise and counterclockwise replication forks are inhibited in the E. coli chromosome. 2) Develop a plasmid system in which the replication blocks are functional to facilitate further study of these sites. 3) Clone and sequence the replication blocks for comparison with each other and with termination sites from other replicons. 4) Use in vitro or in vivo systems to study the mechanism of replication fork inhibition. 5) Study the phenotype of bacterial strains in which combinations of the replication blocks and various other parts of the terminus region have been deleted. The goal is to identify the regions which, when deleted, cause improper segregation of daughter chromosomes, filamentation, and loss of coordination between chromosome replication and cell division. These experiments will provide fundamental information about the control of bacterial growth and division. Information of this type can be readily applied to new approaches for combating bacterial disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM032968-05
Application #
3282233
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1984-01-01
Project End
1989-12-31
Budget Start
1988-01-01
Budget End
1988-12-31
Support Year
5
Fiscal Year
1988
Total Cost
Indirect Cost
Name
University of Colorado at Boulder
Department
Type
Schools of Arts and Sciences
DUNS #
City
Boulder
State
CO
Country
United States
Zip Code
80309
Hendricks, E C; Szerlong, H; Hill, T et al. (2000) Cell division, guillotining of dimer chromosomes and SOS induction in resolution mutants (dif, xerC and xerD) of Escherichia coli. Mol Microbiol 36:973-81
Hojgaard, A; Szerlong, H; Tabor, C et al. (1999) Norfloxacin-induced DNA cleavage occurs at the dif resolvase locus in Escherichia coli and is the result of interaction with topoisomerase IV. Mol Microbiol 33:1027-36
Steiner, W W; Kuempel, P L (1998) Sister chromatid exchange frequencies in Escherichia coli analyzed by recombination at the dif resolvase site. J Bacteriol 180:6269-75
Steiner, W W; Kuempel, P L (1998) Cell division is required for resolution of dimer chromosomes at the dif locus of Escherichia coli. Mol Microbiol 27:257-68
Kuempel, P; Hogaard, A; Nielsen, M et al. (1996) Use of a transposon (Tndif) to obtain suppressing and nonsuppressing insertions of the dif resolvase site of Escherichia coli. Genes Dev 10:1162-71
Tecklenburg, M; Naumer, A; Nagappan, O et al. (1995) The dif resolvase locus of the Escherichia coli chromosome can be replaced by a 33-bp sequence, but function depends on location. Proc Natl Acad Sci U S A 92:1352-6
Gottlieb, P A; Wu, S; Zhang, X et al. (1992) Equilibrium, kinetic, and footprinting studies of the Tus-Ter protein-DNA interaction. J Biol Chem 267:7434-43
Roecklein, B A; Kuempel, P L (1992) In vivo characterization of tus gene expression in Escherichia coli. Mol Microbiol 6:1655-61
Kuempel, P L; Henson, J M; Dircks, L et al. (1991) dif, a recA-independent recombination site in the terminus region of the chromosome of Escherichia coli. New Biol 3:799-811
Hill, T M; Tecklenburg, M L; Pelletier, A J et al. (1989) tus, the trans-acting gene required for termination of DNA replication in Escherichia coli, encodes a DNA-binding protein. Proc Natl Acad Sci U S A 86:1593-7

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