Transposable genetic elements are the generators of a variety of rearrangements which mutate genes and perturb their regulation. These elements promote and regulate their own movement. Their study is important therefore in understanding how the proteins they encode interact with DNA to modify it both by recombining and regulating its genetic potential. Our studies will focus on the model transponson, phage Mu. Mu is unique in being the only transposon whose transposition proteins function efficiently in vitro and are therefore amenable to elaborate biochemical analysis. Mu encodes two mechanisms of DNA transposition- conservative and replicative DNA transposition. We propose to carry out a detailed study of the phage proteins A and B required for both mechanisms of Mu transposition, with a view to understanding structure-function relationships in thes proteins. This would help us understand the molecular details of DNA- protein and protein-protein interactions fundamental to transposition as well as to DNA excision. We also propose to study the 64kDa protein found in infecting Mu DNA. These studies will be important in elucidating the mechanism of conservative DNA transposition. Mu DNA transposition is regulated at many levels. We propose experiments that specifically address the post-transcriptional regulation of A- protein synthesis. We hope to uncover novel ways in which transposases limit their expression and thereby their mutagenic potential.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
7R01GM033247-07
Application #
3282707
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1990-01-01
Project End
1992-11-30
Budget Start
1990-01-01
Budget End
1990-11-30
Support Year
7
Fiscal Year
1990
Total Cost
Indirect Cost
Name
University of Texas Austin
Department
Type
Schools of Arts and Sciences
DUNS #
City
Austin
State
TX
Country
United States
Zip Code
78712
Jang, Sooin; Harshey, Rasika M (2015) Repair of transposable phage Mu DNA insertions begins only when the E.?coli replisome collides with the transpososome. Mol Microbiol 97:746-58
Harshey, Rasika M (2014) Transposable Phage Mu. Microbiol Spectr 2:
Choi, Wonyoung; Saha, Rudra P; Jang, Sooin et al. (2014) Controlling DNA degradation from a distance: a new role for the Mu transposition enhancer. Mol Microbiol 94:595-608
Choi, Wonyoung; Jang, Sooin; Harshey, Rasika M (2014) Mu transpososome and RecBCD nuclease collaborate in the repair of simple Mu insertions. Proc Natl Acad Sci U S A 111:14112-7
Saha, Rudra P; Lou, Zheng; Meng, Luke et al. (2013) Transposable prophage Mu is organized as a stable chromosomal domain of E. coli. PLoS Genet 9:e1003902
Lee, Jaemin; Harshey, Rasika M (2012) Loss of FlhE in the flagellar Type III secretion system allows proton influx into Salmonella and Escherichia coli. Mol Microbiol 84:550-65
Harshey, Rasika M (2012) The Mu story: how a maverick phage moved the field forward. Mob DNA 3:21
Lazova, Milena D; Butler, Mitchell T; Shimizu, Thomas S et al. (2012) Salmonella chemoreceptors McpB and McpC mediate a repellent response to L-cystine: a potential mechanism to avoid oxidative conditions. Mol Microbiol 84:697-711
Jang, Sooin; Sandler, Steven J; Harshey, Rasika M (2012) Mu insertions are repaired by the double-strand break repair pathway of Escherichia coli. PLoS Genet 8:e1002642
Ge, Jun; Lou, Zheng; Cui, Hong et al. (2011) Analysis of phage Mu DNA transposition by whole-genome Escherichia coli tiling arrays reveals a complex relationship to distribution of target selection protein B, transcription and chromosome architectural elements. J Biosci 36:587-601

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