A molecular genetic approach will be used to analyze the specific chemical contacts made between the bacteriophage P22 Mnt repressor protein and its symmetric 17 base pair DNA operator. We will select mutations in the mnt gene that result in a decreased affinity of the Mnt repressor for the wild-type operator (dominant negative phenotype), mutations that result in an increased affinity for the wild-type operator (hyperrepressor phenotype), and mutations that result in both a decreased affinity for the wild-type operator and an increased affinity for at least one of several symmetrically altered operators (altered specificity phenotype). To identify the amino acid residues of Mnt protein that contribute to its specificity of binding, these mutations will be defined precisely by DNA sequencing. The effects of particular mutations on the affinities of Mnt repressor for wild-type and mutant operators will be quantitated in vitro. The long-term goal of this research is an understanding of how proteins recognize specific sequences on DNA molecules. Analysis of these mnt mutations should begin to reveal the nature of the recognition code that underlies DNA/protein interactions. This type of interaction is fundamental to our understanding of the differential control of gene expression.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM034150-03
Application #
3284686
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1984-01-01
Project End
1986-06-30
Budget Start
1985-07-01
Budget End
1986-06-30
Support Year
3
Fiscal Year
1985
Total Cost
Indirect Cost
Name
University of Southern California
Department
Type
Schools of Arts and Sciences
DUNS #
041544081
City
Los Angeles
State
CA
Country
United States
Zip Code
90033
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Shapiro, M; Arvidson, D N; Pfau, J et al. (1993) The challenge-phage assay reveals differences in the binding equilibria of mutant Escherichia coli Trp super-repressors in vivo. Nucleic Acids Res 21:5661-6
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Arvidson, D N; Youderian, P; Schneider, T D et al. (1991) Automated kinetic assay of beta-galactosidase activity. Biotechniques 11:733-4, 736, 738

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