Skp1, an essential subunit of the major SCF-class of ubiquitin (Ub)-ligases important for the turnover of major regulatory proteins, is subject to complex glycosylation in the cytoplasm of the social amoeba Dictyostelium. A project to define the pathway responsible for this unusual modification showed that it depends on an O2-sensitive cytoplasmic prolyl 4-hydroxylase (P4H1). P4H1 is an ortholog of mammalian enzymes proposed to serve as O2-sensors that regulate hypoxic responses of cells via the transcriptional factor subunit hypoxia inducible factor-alpha. Disruption of Dictyostelium P4H1 inhibits an O2-dependent step in terminal differentiation (culmination) suggesting that P4H1 is a critical oxygen-sensor in Dictyostelium that influences the activity of E3(SCF)Ub-ligases that control culmination. P4H1-null cells also apparently fail to induce prestalk cell tip organizer cells that regulate culmination. Using Dictyostelium as a model system for animals and pathogenic protists including Toxoplasma gondii, which informatics and biochemical studies suggest share this regulatory pathway, we will explore the following key predictions of the hypoxic regulation model: 1) P4H1 is expressed in and active in prestalk cell tip organizer cells, where it mediates O2- dependent modification of Skp1 and nuclear accumulation of Skp1. 2) Hyperactive P4H1 mutants isolated by directed evolution in a suppressor screen for hypoxic spore-formers will reveal a direct role of O2-binding in vivo. 3A) Mutation of the Skp1 hydroxylation site will recapitulate the phenotype of P4H1-disruption. 3B) SCF complex subunits will influence Skp1 hydroxylation/glycosylation in vitro. 3C) Skp1 hydroxylation/glycosylation will influence SCF complex formation in vivo. 4) GlcNAc-capping of hydroxylated Skp1 is essential for P4H1 function. The results will provide new infomration about the mechanism of O2- stimulation of P4H1 that is expected to be applicable to understanding of mammalian hypoxic regulation which is important for cancer, inflammation, and wound repair. The findings are expected to define key new steps of a novel mechanism for hypoxic regulation that will be applicable to protozoan parasites and possibly also invertebrate and/or mammalian animals. Based on the new research, drug discovery initiatives for animal P4H enzymes might find unanticipated applications in control of protozoan infectious disease, as inhibitors might compromise pathogen adaptation to hypoxic conditions or stress!

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM037539-19
Application #
7491237
Study Section
Special Emphasis Panel (ZRG1-ICI-G (01))
Program Officer
Marino, Pamela
Project Start
1986-07-01
Project End
2010-08-31
Budget Start
2008-09-01
Budget End
2009-08-31
Support Year
19
Fiscal Year
2008
Total Cost
$293,547
Indirect Cost
Name
University of Oklahoma Health Sciences Center
Department
Biochemistry
Type
Schools of Medicine
DUNS #
878648294
City
Oklahoma City
State
OK
Country
United States
Zip Code
73117
Gas-Pascual, Elisabet; Ichikawa, Hiroshi Travis; Sheikh, Mohammed Osman et al. (2018) CRISPR/Cas9 and glycomics tools for Toxoplasma glycobiology. J Biol Chem :
Xu, Xianzhong; Eletsky, Alexander; Sheikh, M Osman et al. (2018) Glycosylation Promotes the Random Coil to Helix Transition in a Region of a Protist Skp1 Associated with F-Box Binding. Biochemistry 57:511-515
Sheikh, M Osman; Thieker, David; Chalmers, Gordon et al. (2017) O2 sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases. J Biol Chem 292:18897-18915
Sheikh, M Osman; Halmo, Stephanie M; Patel, Sneha et al. (2017) Rapid screening of sugar-nucleotide donor specificities of putative glycosyltransferases. Glycobiology 27:206-212
Summers, Jody A; Harper, Angelica R; Feasley, Christa L et al. (2016) Identification of Apolipoprotein A-I as a Retinoic Acid-binding Protein in the Eye. J Biol Chem 291:18991-9005
West, Christopher M; Blader, Ira J (2015) Oxygen sensing by protozoans: how they catch their breath. Curr Opin Microbiol 26:41-7
Feasley, Christa L; van der Wel, Hanke; West, Christopher M (2015) Evolutionary diversity of social amoebae N-glycomes may support interspecific autonomy. Glycoconj J 32:345-59
Sheikh, M Osman; Xu, Yuechi; van der Wel, Hanke et al. (2015) Glycosylation of Skp1 promotes formation of Skp1-cullin-1-F-box protein complexes in dictyostelium. Mol Cell Proteomics 14:66-80
Chinoy, Zoeisha S; Schafer, Christopher M; West, Christopher M et al. (2015) Chemical Synthesis of a Glycopeptide Derived from Skp1 for Probing Protein Specific Glycosylation. Chemistry 21:11779-87
Sheikh, M Osman; Schafer, Christopher M; Powell, John T et al. (2014) Glycosylation of Skp1 affects its conformation and promotes binding to a model f-box protein. Biochemistry 53:1657-69

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