Our long term goal is to understand the signals that pattern the early vertebrate embryo. We study this problem predominantly in the frog Xenopus laevis. This animal produces large numbers of eggs that are readily manipulated by injection and microsurgery. The combination of experimental embryology and molecular manipulation provide the tools to understand embryonic signaling at the molecular level. Despite the progress that has been made in understanding embryonic signals, there is still only a partial picture of how the detailed pattern of the embryo emerges. The main hypothesis driving work in the next grant period is that there are a substantial number of embryonic signaling activities that remain to be identified. We will identify these signals so that they can be further understood at the embryological and molecular level. In the next grant period, there are three general areas that will be pursued: We will study signals from the neural plate that influence mesodermal and neural fates. We will further dissect the wnt signal transduction pathway that leads to early events of axis formation, and sensitization of the ectoderm to neuralizing signals. Finally, we will use our proven expression cloning techniques to isolate and study molecules that influence mesodermal and neural pattern. Many of the same cellular mechanisms are used in embryos and in adults; therefore an increased understanding of the basic biology of development will improve our understanding of human development and physiology.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM042341-17
Application #
6476506
Study Section
Cell Development and Function Integrated Review Group (CDF)
Program Officer
Zatz, Marion M
Project Start
1988-09-01
Project End
2003-11-30
Budget Start
2001-12-01
Budget End
2002-11-30
Support Year
17
Fiscal Year
2002
Total Cost
$329,497
Indirect Cost
Name
University of California Berkeley
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
094878337
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Mena, Elijah L; Kjolby, Rachel A S; Saxton, Robert A et al. (2018) Dimerization quality control ensures neuronal development and survival. Science 362:
Willsey, Helen Rankin; Walentek, Peter; Exner, Cameron R T et al. (2018) Katanin-like protein Katnal2 is required for ciliogenesis and brain development in Xenopus embryos. Dev Biol 442:276-287
Sun, Dingyuan I; Tasca, Alexia; Haas, Maximilian et al. (2018) Na+/H+ Exchangers Are Required for the Development and Function of Vertebrate Mucociliary Epithelia. Cells Tissues Organs :1-14
Young, John J; Kjolby, Rachel A S; Wu, Gloria et al. (2017) Noggin is required for first pharyngeal arch differentiation in the frog Xenopus tropicalis. Dev Biol 426:245-254
Stafford, David A; Dichmann, Darwin S; Chang, Jessica K et al. (2017) Deletion of the sclerotome-enriched lncRNA PEAT augments ribosomal protein expression. Proc Natl Acad Sci U S A 114:101-106
Kjolby, Rachel A S; Harland, Richard M (2017) Genome-wide identification of Wnt/?-catenin transcriptional targets during Xenopus gastrulation. Dev Biol 426:165-175
Shyer, Amy E; Rodrigues, Alan R; Schroeder, Grant G et al. (2017) Emergent cellular self-organization and mechanosensation initiate follicle pattern in the avian skin. Science 357:811-815
Exner, Cameron R T; Kim, Albert Y; Mardjuki, Sarah M et al. (2017) sall1 and sall4 repress pou5f3 family expression to allow neural patterning, differentiation, and morphogenesis in Xenopus laevis. Dev Biol 425:33-43
Walentek, Peter; Quigley, Ian K; Sun, Dingyuan I et al. (2016) Ciliary transcription factors and miRNAs precisely regulate Cp110 levels required for ciliary adhesions and ciliogenesis. Elife 5:
Session, Adam M; Uno, Yoshinobu; Kwon, Taejoon et al. (2016) Genome evolution in the allotetraploid frog Xenopus laevis. Nature 538:336-343

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