The protein tubulin plays a vital role in the life of all eucaryotic cells. Microtubules, made mostly of tubulin, are involved in organelle movement, separation of chromosomes during cell division, and maintenance of cell shape, for instance. The assembly and disassembly of microtubules at certain times are critical steps in the cell cycle, It is important to understand how tubulin molecules interact with each other as well as with large number of other proteins in these activities in order to have a full understanding of the life of a cell, and it will be necessary to know the structure of tubulin before we can understand these interactions. We are studying tubulin structure by electron crystallography of two-dimensional, crystalline sheets that form in the presence of zinc ions. These sheets are an ideal form for study in the electron microscope, and circumvent the problem that attempts have so far been unsuccessful to obtain crystals of tubulin for x-ray crystallography. Electron crystallographic methods have been developed in the recent years to the point where it will be possible to derive a three-dimensional density map at a resolution of around 3,5 Angstroms, sufficient to build an atomic model of the structure. Combined with atomic structures of motor molecules or other microtubule-associated proteins, we will then be able to understand in detail, for example, how the proteins interact to produce directed motion and to enhance microtubule stability. Even at lower resolution we are able to gain substantial understanding of the relation between tubulin's structure and function and interactions with other molecules. In addition, a number of clinically useful drugs interact with tubulin, and the structure of tubulin-drug analogs that may modulate the interactions and provide more specific drug effects.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM046033-06
Application #
2518969
Study Section
Biophysical Chemistry Study Section (BBCB)
Project Start
1996-09-09
Project End
2000-08-31
Budget Start
1997-09-01
Budget End
1998-08-31
Support Year
6
Fiscal Year
1997
Total Cost
Indirect Cost
Name
Lawrence Berkeley National Laboratory
Department
Biology
Type
Organized Research Units
DUNS #
078576738
City
Berkeley
State
CA
Country
United States
Zip Code
94720
Sindelar, Charles V; Downing, Kenneth H (2010) An atomic-level mechanism for activation of the kinesin molecular motors. Proc Natl Acad Sci U S A 107:4111-6
Cochran, Jared C; Sindelar, Charles V; Mulko, Natasha K et al. (2009) ATPase cycle of the nonmotile kinesin NOD allows microtubule end tracking and drives chromosome movement. Cell 136:110-22
Dietrich, Kristen A; Sindelar, Charles V; Brewer, Paul D et al. (2008) The kinesin-1 motor protein is regulated by a direct interaction of its head and tail. Proc Natl Acad Sci U S A 105:8938-43
Wolf, S G; Mosser, G; Downing, K H (1993) Tubulin conformation in zinc-induced sheets and macrotubes. J Struct Biol 111:190-9