Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM048807-01A2
Application #
3308258
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Project Start
1994-05-01
Project End
1994-08-31
Budget Start
1994-05-01
Budget End
1994-08-31
Support Year
1
Fiscal Year
1994
Total Cost
Indirect Cost
Name
Carnegie-Mellon University
Department
Type
Schools of Arts and Sciences
DUNS #
052184116
City
Pittsburgh
State
PA
Country
United States
Zip Code
15213
Hills Jr, Ronald D; Kathuria, Sagar V; Wallace, Louise A et al. (2010) Topological frustration in beta alpha-repeat proteins: sequence diversity modulates the conserved folding mechanisms of alpha/beta/alpha sandwich proteins. J Mol Biol 398:332-50
Arora, Karunesh; Brooks Iii 3rd, Charles L (2009) Functionally important conformations of the Met20 loop in dihydrofolate reductase are populated by rapid thermal fluctuations. J Am Chem Soc 131:5642-7
Hills Jr, Ronald D; Brooks 3rd, Charles L (2008) Subdomain competition, cooperativity, and topological frustration in the folding of CheY. J Mol Biol 382:485-95
Chen, Jianhan; Brooks 3rd, Charles L; Khandogin, Jana (2008) Recent advances in implicit solvent-based methods for biomolecular simulations. Curr Opin Struct Biol 18:140-8
Hills Jr, Ronald D; Brooks 3rd, Charles L (2008) Coevolution of function and the folding landscape: correlation with density of native contacts. Biophys J 95:L57-9
Shahrezaei, Vahid; Swain, Peter S (2008) The stochastic nature of biochemical networks. Curr Opin Biotechnol 19:369-74
Khandogin, Jana; Brooks 3rd, Charles L (2007) Linking folding with aggregation in Alzheimer's beta-amyloid peptides. Proc Natl Acad Sci U S A 104:16880-5
Arora, Karunesh; Brooks 3rd, Charles L (2007) Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism. Proc Natl Acad Sci U S A 104:18496-501
Chen, Jianhan; Brooks 3rd, Charles L (2007) Critical importance of length-scale dependence in implicit modeling of hydrophobic interactions. J Am Chem Soc 129:2444-5
Khandogin, Jana; Raleigh, Daniel P; Brooks 3rd, Charles L (2007) Folding intermediate in the villin headpiece domain arises from disruption of a N-terminal hydrogen-bonded network. J Am Chem Soc 129:3056-7

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