A small number of genes in mammals are regulated by genomic imprinting, a process that results in unequal expression of the maternal and paternal alleles of certain genes. As a consequence, deleterious mutations or deletions in the single expressed allele of an imprinted gene will result in the absence of a functional gene product. In humans, disruptions in imprinting and imprinted genes account for the human genetic diseases Beckwith-Wiedemann Syndrome, Prader-Willi Syndrome and Angelman Syndrome and for cancers such as Wilms' tumor. The objective of this proposal is to investigate the mechanism by which parental identity of imprinted genes is established. The studies will employ the H19 gene, which is expressed from the maternally derived allele in mice and humans. Specifically, the role of a region differentially methylated at the mouse H19 locus will be studied. This differentially methylated domain (DMD) is located from -2 kb to -4 kb relative to the start of H19 transcription and is hypermethylated exclusively in male gametes and on the paternal allele throughout development, thereby fulfilling important criteria for the mark that distinguishes parental alleles of H19. The DMD is essential to imprint H19 transgenes as well as the endogenous H19 gene, and the linked and oppositely imprinted Igf2 gene. This proposal will investigate the role of the 2 kb DMD through the following experiments: (1) to determine if the DMD is sufficient for imprinting, hybrid transgenes that link the DMD to an H19 minigene or a heterologous gene and regulatory elements will be tested for imprinting in mice; (2) to determine whether specific CpG dinucleotides within the DMD are essential for imprinting, transgenes that harbor mutations of individual CpG dinucleotides will be examined for imprinting in mice; (3) to investigate whether the DMD is required for the establishment and/or maintenance of the genomic imprint, mice that harbor a deletion of the DMD at the endogenous locus will be examined for early imprinted expression; additionally, mice that harbor a conditional allele of the DMD deletion will be generated so that the DMD can be removed at a time after imprinted H19 expression is observed; (4) to determine when parental identity of H19 is acquired during gametogenesis, male germ cells will be studied to determine when the paternal-specific pattern of methylation is first imposed on the H19 gene. Knowledge of the sequences required for imprinting and the timing of imprint establishment is essential for the identification of the trans-acting factors that mediate genomic imprinting.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM051279-08
Application #
6386056
Study Section
Mammalian Genetics Study Section (MGN)
Program Officer
Carter, Anthony D
Project Start
1994-08-01
Project End
2003-07-31
Budget Start
2001-08-01
Budget End
2002-07-31
Support Year
8
Fiscal Year
2001
Total Cost
$187,927
Indirect Cost
Name
University of Pennsylvania
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Hur, Stella K; Freschi, Andrea; Ideraabdullah, Folami et al. (2016) Humanized H19/Igf2 locus reveals diverged imprinting mechanism between mouse and human and reflects Silver-Russell syndrome phenotypes. Proc Natl Acad Sci U S A 113:10938-43
Ginart, Paul; Kalish, Jennifer M; Jiang, Connie L et al. (2016) Visualizing allele-specific expression in single cells reveals epigenetic mosaicism in an H19 loss-of-imprinting mutant. Genes Dev 30:567-78
Plasschaert, Robert N; Bartolomei, Marisa S (2015) Tissue-specific regulation and function of Grb10 during growth and neuronal commitment. Proc Natl Acad Sci U S A 112:6841-7
Zhong, Cuiqing; Yin, Qi; Xie, Zhenfei et al. (2015) CRISPR-Cas9-Mediated Genetic Screening in Mice with Haploid Embryonic Stem Cells Carrying a Guide RNA Library. Cell Stem Cell 17:221-32
Ideraabdullah, Folami Y; Thorvaldsen, Joanne L; Myers, Jennifer A et al. (2014) Tissue-specific insulator function at H19/Igf2 revealed by deletions at the imprinting control region. Hum Mol Genet 23:6246-59
Weaver, Jamie R; Bartolomei, Marisa S (2014) Chromatin regulators of genomic imprinting. Biochim Biophys Acta 1839:169-77
Venkatraman, Aparna; He, Xi C; Thorvaldsen, Joanne L et al. (2013) Maternal imprinting at the H19-Igf2 locus maintains adult haematopoietic stem cell quiescence. Nature 500:345-9
Abramowitz, Lara K; Bartolomei, Marisa S (2012) Genomic imprinting: recognition and marking of imprinted loci. Curr Opin Genet Dev 22:72-8
Wu, Xin; Goodyear, Shaun M; Abramowitz, Lara K et al. (2012) Fertile offspring derived from mouse spermatogonial stem cells cryopreserved for more than 14 years. Hum Reprod 27:1249-59
Hudson, Quanah J; Seidl, Christine I M; Kulinski, Tomasz M et al. (2011) Extra-embryonic-specific imprinted expression is restricted to defined lineages in the post-implantation embryo. Dev Biol 353:420-31

Showing the most recent 10 out of 41 publications