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Gerlt, John A; Babbitt, Patricia C (2009) Enzyme (re)design: lessons from natural evolution and computation. Curr Opin Chem Biol 13:10-8
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Rakus, John F; Fedorov, Alexander A; Fedorov, Elena V et al. (2008) Evolution of enzymatic activities in the enolase superfamily: L-rhamnonate dehydratase. Biochemistry 47:9944-54
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Vick, Jacob E; Gerlt, John A (2007) Evolutionary potential of (beta/alpha)8-barrels: stepwise evolution of a ""new"" reaction in the enolase superfamily. Biochemistry 46:14589-97
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Rakus, John F; Fedorov, Alexander A; Fedorov, Elena V et al. (2007) Evolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivorans. Biochemistry 46:12896-908
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Glasner, Margaret E; Gerlt, John A; Babbitt, Patricia C (2007) Mechanisms of protein evolution and their application to protein engineering. Adv Enzymol Relat Areas Mol Biol 75:193-239, xii-xiii
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Glasner, Margaret E; Gerlt, John A; Babbitt, Patricia C (2006) Evolution of enzyme superfamilies. Curr Opin Chem Biol 10:492-7
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Brown, Shoshana D; Gerlt, John A; Seffernick, Jennifer L et al. (2006) A gold standard set of mechanistically diverse enzyme superfamilies. Genome Biol 7:R8
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Yew, Wen Shan; Fedorov, Alexander A; Fedorov, Elena V et al. (2006) Evolution of enzymatic activities in the enolase superfamily: D-tartrate dehydratase from Bradyrhizobium japonicum. Biochemistry 45:14598-608
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Yew, Wen Shan; Fedorov, Alexander A; Fedorov, Elena V et al. (2006) Evolution of enzymatic activities in the enolase superfamily: L-fuconate dehydratase from Xanthomonas campestris. Biochemistry 45:14582-97
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Sakai, Ayano; Xiang, Dao Feng; Xu, Chengfu et al. (2006) Evolution of enzymatic activities in the enolase superfamily: N-succinylamino acid racemase and a new pathway for the irreversible conversion of D- to L-amino acids. Biochemistry 45:4455-62
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