This proposal concerns the regulatory GTPases Ran and Rho, which are involved in the control of polarized cell behavior and nuclear import. Novel fluorescent protein analogs will be designed to report the nucleotide state of these small GTPase signalling proteins within individual, living cells. Alternate approaches will be developed to enable production of such analogs based on a wide variety of GTPases, and these methods will be applied here to produce indicators of Ran and Rho family GTPases. Because small GTPases are ubiquitous and impact diverse fundamental cell behaviors, the new technology validated in these studies will be of broad utility and significance. A full understanding of Rho family and Ran GTPase function requires knowledge of the spatial organization of signalling within intact cells. The nucleotide state indicators will be used to study the spatial and temporal dynamics of GTPase activation in living cells. The mechanisms by which Rho GTPases control cell polarization and motility will be examined in wound healing fibroblasts by characterizing changes in subcellular localization, the spatial and temporal dynamics of activation, and by correlating these behaviors with the dynamics of the cytoskeleton. Both the location and levels of activation will be quantified. Hypotheses regarding modulation of integrin and growth factor crosstalk through GTPase localization and variation of activation levels will be explored. In studies of Ran function, the indicators will reveal the nucleotide state of Ran in different subcellular locations, distinguishing between potential mechanisms for regulation of nuclear import rate and cell cycle feedback controls linking progression of mitosis to DNA replication. The fundamental processes controlled by these GTPases, including cell motility, nuclear import, and regulation of cell morphology, are critical to normal homeostasis and relevant to many diseases and immune function.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM057464-01A1
Application #
2853626
Study Section
Cellular Biology and Physiology Subcommittee 1 (CBY)
Project Start
1999-06-01
Project End
2003-05-31
Budget Start
1999-06-01
Budget End
2000-05-31
Support Year
1
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Scripps Research Institute
Department
Type
DUNS #
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Khalil, Bassem D; Hanna, Samer; Saykali, Bechara A et al. (2014) The regulation of RhoA at focal adhesions by StarD13 is important for astrocytoma cell motility. Exp Cell Res 321:109-22
Allen, R J; Tsygankov, D; Zawistowski, J S et al. (2014) Automated line scan analysis to quantify biosensor activity at the cell edge. Methods 66:162-7
Karginov, Andrei V; Hahn, Klaus M; Deiters, Alexander (2014) Optochemical activation of kinase function in live cells. Methods Mol Biol 1148:31-43
Tsygankov, Denis; Bilancia, Colleen G; Vitriol, Eric A et al. (2014) CellGeo: a computational platform for the analysis of shape changes in cells with complex geometries. J Cell Biol 204:443-60
Samson, Thomas; van Buul, Jaap D; Kroon, Jeffrey et al. (2013) The guanine-nucleotide exchange factor SGEF plays a crucial role in the formation of atherosclerosis. PLoS One 8:e55202
Hinde, Elizabeth; Digman, Michelle A; Hahn, Klaus M et al. (2013) Millisecond spatiotemporal dynamics of FRET biosensors by the pair correlation function and the phasor approach to FLIM. Proc Natl Acad Sci U S A 110:135-40
Konze, Kyle D; Ma, Anqi; Li, Fengling et al. (2013) An orally bioavailable chemical probe of the Lysine Methyltransferases EZH2 and EZH1. ACS Chem Biol 8:1324-34
MacNevin, Christopher J; Gremyachinskiy, Dmitriy; Hsu, Chia-Wen et al. (2013) Environment-sensing merocyanine dyes for live cell imaging applications. Bioconjug Chem 24:215-23
Lungu, Oana I; Hallett, Ryan A; Choi, Eun Jung et al. (2012) Designing photoswitchable peptides using the AsLOV2 domain. Chem Biol 19:507-17
Hinde, Elizabeth; Digman, Michelle A; Welch, Christopher et al. (2012) Biosensor Förster resonance energy transfer detection by the phasor approach to fluorescence lifetime imaging microscopy. Microsc Res Tech 75:271-81

Showing the most recent 10 out of 40 publications