The overall goals of the project are (1) to understand the biology, genetics, and pathogenesis of diseases associated with deficiency of human chromosome 15q11-q13 and the homologous region of mouse chromosome 7, both of which contain numerous imprinted genes, and (2) to study selected basic aspects of imprinted gene expression. Paternal deficiency for human 15q11-q13 causes Prader-Willi syndrome (PWS) while maternal deficiency causes Angelman syndrome (AS). The first specific aim is to extend mutational analysis in AS patients in whom no molecular defect is identified to date with particularly emphasis on identifying additional missense mutations in UBE3A, the locus that is mutated in AS and encodes E6-AP ubiquitin protein ligase, and on identifying mutations in cis regulatory elements essential for expression of UBE3A. The second specific aim is to perform detailed phenotypic analysis of Ube3a knockout mice comparing maternal deficiency (AS) model, paternal deficiency, and homozygous deficiency with wild type mice. Emphasis will be on behavioral and learning studies, electrophysiological analysis of long-term potentiation, and immunohistochemical studies. The third specific aim is to perform an extensive genetic analysis of the PWS/AS region in the mouse by preparing a series of null mutations for Snrpn, Ipw, Gabrb3, Ndn, and newly identified genes. In addition, deletions will be prepared across intervals in the region with a focus on determining which loci account for the perinatal lethal phenotype associated with paternal deficiency for the region (potential equivalent to PWS) and on identifying cis regulatory elements upstream or downstream of Ube3A. The fourth specific aim is to define the putative imprinting center (IC) by constructing deletions upstream of Snrpn in the mouse to obtain mutations that prevent switching between paternal and maternal epigenotypes. The fifth specific aim is to develop a novel and broadly applicable method for visualizing regulation of gene expression through coat color variation and screen for cis- and trans- acting mutations that affect imprinted gene expression. Imprinted expression of the agouti cDNA under the control of the Snrpn promoter has been obtained, and ENU mutagenesis will be utilized. This project is directly relevant to the mental retardation found in PWS and AS, and the Ube3a mutant mouse has the potential to increase our understanding of learning and memory. The use of a coat color marker as a reporter for analysis of gene regulation in vivo in combination with mutagenesis has general applicability beyond imprinted gene expression.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Research Project (R01)
Project #
5R01HD037283-02
Application #
6138863
Study Section
Genome Study Section (GNM)
Program Officer
Oster-Granite, Mary Lou
Project Start
1999-01-01
Project End
2003-12-31
Budget Start
2000-01-01
Budget End
2000-12-31
Support Year
2
Fiscal Year
2000
Total Cost
$514,407
Indirect Cost
Name
Baylor College of Medicine
Department
Genetics
Type
Schools of Medicine
DUNS #
074615394
City
Houston
State
TX
Country
United States
Zip Code
77030
Dickinson, Mary E; Flenniken, Ann M; Ji, Xiao et al. (2017) Corrigendum: High-throughput discovery of novel developmental phenotypes. Nature 551:398
Zoghbi, Huda Y; Beaudet, Arthur L (2016) Epigenetics and Human Disease. Cold Spring Harb Perspect Biol 8:a019497
Beaudet, Arthur L; Meng, Linyan (2016) Gene-targeting pharmaceuticals for single-gene disorders. Hum Mol Genet 25:R18-26
Meng, Linyan; Ward, Amanda J; Chun, Seung et al. (2015) Towards a therapy for Angelman syndrome by targeting a long non-coding RNA. Nature 518:409-12
Chung, Leeyup; Wang, Xiaoming; Zhu, Li et al. (2015) Parental origin impairment of synaptic functions and behaviors in cytoplasmic FMRP interacting protein 1 (Cyfip1) deficient mice. Brain Res 1629:340-50
Soler-Alfonso, Claudia; Carvalho, Claudia M B; Ge, Jun et al. (2014) CHRNA7 triplication associated with cognitive impairment and neuropsychiatric phenotypes in a three-generation pedigree. Eur J Hum Genet 22:1071-6
Meng, Linyan; Person, Richard Erwin; Huang, Wei et al. (2013) Truncation of Ube3a-ATS unsilences paternal Ube3a and ameliorates behavioral defects in the Angelman syndrome mouse model. PLoS Genet 9:e1004039
Schaaf, Christian P; Gonzalez-Garay, Manuel L; Xia, Fan et al. (2013) Truncating mutations of MAGEL2 cause Prader-Willi phenotypes and autism. Nat Genet 45:1405-8
Beaudet, Arthur L (2013) The utility of chromosomal microarray analysis in developmental and behavioral pediatrics. Child Dev 84:121-32
Wu, Ray-Chang; Jiang, Ming; Beaudet, Arthur L et al. (2013) ARID4A and ARID4B regulate male fertility, a functional link to the AR and RB pathways. Proc Natl Acad Sci U S A 110:4616-21

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