Impaired mitochondrial oxidative phosphorylation (OXPHOS) capacity causes complex, degenerative disorders that affect all major organs and systems including heart, skeletal muscle and the nervous system. These diseases result from mutations in either nuclear genes or mtDNA, both of which encode essential OXPHOS components. There is also a documented decline in mitochondrial OXPHOS capacity with age, which correlates with the accumulation of mtDNA mutations in normal aging tissues. Therefore, mitochondrial involvement in the aging process and in the etiology of late-onset disorders such as cardiomyopathy and the common neurodegenerative diseases, Alzheimer's and Parkinson's, is almost certain. ? ? Transcription of human mtDNA-encoded OXPHOS subunits is initiated by a single-subunit mitochondrial RNA polymerase and two transcription factors. This relatively simple transcriptional apparatus not only makes this system an excellent model in which to understand transcriptional regulation in general, but also increases the likelihood of deciphering how this process is regulated in vivo in a relatively short time frame. Such advancement will allow the contribution of mitochondrial gene expression to the overall regulation of OXPHOS to be established and perhaps facilitate development of novel ways to counteract the pathological consequences resulting from lack of proper mitochondrial gene expression in human cells. ? ? The overall goal of this project is to understand how mitochondrial RNA polymerase. transcription factors and other key regulatory proteins function to control mitochondrial gene expression.
Specific Aim I is to characterize the activation properties of a recently discovered human mitochondrial transcription factor (hmtTFB) at mtDNA promoters and the relevance of its novel relationship to enzymes that methylate RNA.
Specific Aim II is to elucidate subsequent steps of mitochondrial gene expression, which involve the coupling of transcription to membrane-associated events involved in translation. In both aims, we take advantage of a yeast model system and utilize the information gained to guide our studies on the corresponding human components. Altogether, it is anticipated that completion of these aims will provide important new information regarding the control of mitochondrial gene expression, which is critical in order to unravel the complex involvement of OXPHOS dysfunction in human diseases and aging.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL059655-09
Application #
7072278
Study Section
Physiological Chemistry Study Section (PC)
Program Officer
Liang, Isabella Y
Project Start
1997-09-30
Project End
2008-01-31
Budget Start
2006-07-01
Budget End
2008-01-31
Support Year
9
Fiscal Year
2006
Total Cost
$279,402
Indirect Cost
Name
Yale University
Department
Pathology
Type
Schools of Medicine
DUNS #
043207562
City
New Haven
State
CT
Country
United States
Zip Code
06520
Bestwick, Megan L; Shadel, Gerald S (2013) Accessorizing the human mitochondrial transcription machinery. Trends Biochem Sci 38:283-91
Surovtseva, Yulia V; Shadel, Gerald S (2013) Transcription-independent role for human mitochondrial RNA polymerase in mitochondrial ribosome biogenesis. Nucleic Acids Res 41:2479-88
Lodeiro, Maria F; Uchida, Akira; Bestwick, Megan et al. (2012) Transcription from the second heavy-strand promoter of human mtDNA is repressed by transcription factor A in vitro. Proc Natl Acad Sci U S A 109:6513-8
Raimundo, Nuno; Song, Lei; Shutt, Timothy E et al. (2012) Mitochondrial stress engages E2F1 apoptotic signaling to cause deafness. Cell 148:716-26
Surovtseva, Yulia V; Shutt, Timothy E; Cotney, Justin et al. (2011) Mitochondrial ribosomal protein L12 selectively associates with human mitochondrial RNA polymerase to activate transcription. Proc Natl Acad Sci U S A 108:17921-6
Baysal, Bora E; McKay, Sharen E; Kim, Yoon Jung et al. (2011) Genomic imprinting at a boundary element flanking the SDHD locus. Hum Mol Genet 20:4452-61
Liu, Lijun; Sanosaka, Masato; Lei, Shi et al. (2011) LRP130 protein remodels mitochondria and stimulates fatty acid oxidation. J Biol Chem 286:41253-64
Chatenay-Lapointe, Marc; Shadel, Gerald S (2011) Repression of mitochondrial translation, respiration and a metabolic cycle-regulated gene, SLF1, by the yeast Pumilio-family protein Puf3p. PLoS One 6:e20441
Shutt, Timothy E; Shadel, Gerald S (2010) A compendium of human mitochondrial gene expression machinery with links to disease. Environ Mol Mutagen 51:360-79
Shutt, Timothy E; Lodeiro, Maria F; Cotney, Justin et al. (2010) Core human mitochondrial transcription apparatus is a regulated two-component system in vitro. Proc Natl Acad Sci U S A 107:12133-8

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