The overall goal of this research is to explore the biological function of protein methylation reactions, with particular attention to their possible roles in neuronal function. Our studies will focus on two distinct methyltransferase enzymes. One, protein L-isoaspartyl methyltransferase (PIMT). catalyzes methylation of atypical isoaspartyl sites (isoAsp) that arise in certain proteins as a form of spontaneous damage. IsoAsp can render proteins dysfunctional, and/or highly immunogenic in the same animal from which they are derived. Moreover, PIMT knock-out mice accumulate high levels of intracellular isoAsp sites and develop fatal epileptic seizures at 4-6 weeks. To understand more about the function of PIMT and the consequences of isoAsp accumulation, we will: (1) determine if PIMT functions in vivo to rescue damaged proteins or to facilitate their degradation by comparing the turnover rate of histone H2B (a major in vivo substrate for PIMT) in normal vs. PIMT-deficient cells, and by comparing the racemization of the isoAsp prone Asp-25 residue in H2B; (2) identify how isoAsp accumulation affects the function of synapsin-1 and other synaptosomal proteins; (3) determine if isoAsp sites greatly enhance the immunogenicity of mouse H2B in that same species, the extent to which isoAsp H2B induces an autoimmune pathology, and if the sera of patients afflicted with autoimmune diseases such as systemic lupus erythematosus have antibodies or T cells that selectively recognize the isoAsp form of H2B. The second enzyme to be studied is coactivator-associated arginine methyltransferase 1 (CARM 1), an enzyme that forms complexes with specific transcription factors that mediate glucocorticoid-regulated gene expression. To understand more about the function of CARM 1 we will (1) determine if purified HuD (an mRNA-binding protein implicated in neuronal development) is an in vivo substrate for CARM 1 and search for additional CARM 1 substrates in rat PC12 cells using a previously developed methyltransferase inhibitor-based strategy, and (2) determine if mammalian brain (or other tissues) contain a protein-arginine demethylating enzyme that may reverse the methylation reactions catalyzed by CARM 1 and/or related protein arginine methyltransferases. Our proposed studies on PIMT should provide new insights as to the possible contribution of isoAsp formation and PIMT deficiency in diseases afflicting the brain and possibly the immune system. Similarly, studies on CARM1 should provide important new information on how glucocorticoids regulate gene expression in the brain.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
2R01NS017269-20A1
Application #
6479001
Study Section
Physiological Chemistry Study Section (PC)
Program Officer
Edwards, Emmeline
Project Start
1981-04-01
Project End
2006-02-28
Budget Start
2002-03-22
Budget End
2003-02-28
Support Year
20
Fiscal Year
2002
Total Cost
$287,328
Indirect Cost
Name
University of California Irvine
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
161202122
City
Irvine
State
CA
Country
United States
Zip Code
92697
Qin, Zhenxia; Zhu, Jeff X; Aswad, Dana W (2016) The D-isoAsp-25 variant of histone H2B is highly enriched in active chromatin: potential role in the regulation of gene expression? Amino Acids 48:599-603
Qin, Zhenxia; Dimitrijevic, Aleksandra; Aswad, Dana W (2015) Accelerated protein damage in brains of PIMT+/- mice; a possible model for the variability of cognitive decline in human aging. Neurobiol Aging 36:1029-36
Qin, Zhenxia; Yang, Jing; Klassen, Henry J et al. (2014) Isoaspartyl protein damage and repair in mouse retina. Invest Ophthalmol Vis Sci 55:1572-9
Dimitrijevic, Aleksandra; Qin, Zhenxia; Aswad, Dana W (2014) Isoaspartyl formation in creatine kinase B is associated with loss of enzymatic activity; implications for the linkage of isoaspartate accumulation and neurological dysfunction in the PIMT knockout mouse. PLoS One 9:e100622
Qin, Zhenxia; Kaufman, Rachel S; Khoury, Rana N et al. (2013) Isoaspartate accumulation in mouse brain is associated with altered patterns of protein phosphorylation and acetylation, some of which are highly sex-dependent. PLoS One 8:e80758
Doyle, Hester A; Aswad, Dana W; Mamula, Mark J (2013) Autoimmunity to isomerized histone H2B in systemic lupus erythematosus. Autoimmunity 46:6-13
Morrison, Gareth J; Ganesan, Ranjani; Qin, Zhenxia et al. (2012) Considerations in the identification of endogenous substrates for protein L-isoaspartyl methyltransferase: the case of synuclein. PLoS One 7:e43288
Khoury, Mitri K; Parker, Ian; Aswad, Dana W (2010) Acquisition of chemiluminescent signals from immunoblots with a digital single-lens reflex camera. Anal Biochem 397:129-31
Carter, Wayne G; Aswad, Dana W (2008) Formation, localization, and repair of L-isoaspartyl sites in histones H2A and H2B in nucleosomes from rat liver and chicken erythrocytes. Biochemistry 47:10757-64
Zhu, Jeff X; Aswad, Dana W (2007) Selective cleavage of isoaspartyl peptide bonds by hydroxylamine after methyltransferase priming. Anal Biochem 364:1-7

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