Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Research Project (R01)
Project #
7R01RR007861-07
Application #
2692414
Study Section
Genome Study Section (GNM)
Project Start
1992-08-15
Project End
1998-07-31
Budget Start
1997-12-16
Budget End
1998-07-31
Support Year
7
Fiscal Year
1997
Total Cost
Indirect Cost
Name
Pangea Systems, Inc.
Department
Type
DUNS #
City
Oakland
State
CA
Country
United States
Zip Code
94612
Paley, Suzanne M; Karp, Peter D (2006) The Pathway Tools cellular overview diagram and Omics Viewer. Nucleic Acids Res 34:3771-8
Green, M L; Karp, P D (2006) The outcomes of pathway database computations depend on pathway ontology. Nucleic Acids Res 34:3687-97
Junker, Bjorn H; Koschutzki, Dirk; Schreiber, Falk (2006) Exploration of biological network centralities with CentiBiN. BMC Bioinformatics 7:219
Salgado, Heladia; Gama-Castro, Socorro; Peralta-Gil, Martin et al. (2006) RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. Nucleic Acids Res 34:D394-7
Salgado, Heladia; Santos-Zavaleta, Alberto; Gama-Castro, Socorro et al. (2006) The comprehensive updated regulatory network of Escherichia coli K-12. BMC Bioinformatics 7:5
Caspi, Ron; Foerster, Hartmut; Fulcher, Carol A et al. (2006) MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res 34:D511-6
Keseler, Ingrid M; Collado-Vides, Julio; Gama-Castro, Socorro et al. (2005) EcoCyc: a comprehensive database resource for Escherichia coli. Nucleic Acids Res 33:D334-7
Green, M L; Karp, P D (2005) Genome annotation errors in pathway databases due to semantic ambiguity in partial EC numbers. Nucleic Acids Res 33:4035-9
Krieger, Cynthia J; Zhang, Peifen; Mueller, Lukas A et al. (2004) MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res 32:D438-42
Salgado, Heladia; Gama-Castro, Socorro; Martinez-Antonio, Agustino et al. (2004) RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12. Nucleic Acids Res 32:D303-6

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