Neuroimaging has become an accepted tool for studying neurodegeneration, neurodevelopment, and brain structure/neurocognitive relationships. Deformation based morphometry (DBM) is a method for analyzing and quantifying the relationship between brain anatomy and disease or function, typically by computing statistics using three-dimensional (3D) maps of local anatomical size derived from nonrigid image registration methods. The high-resolution morphometric analysis software currently available for DBM has limitations that prevent its wide dissemination and acceptance. The goals of this project are to develop voxel-wise statistical analysis software using public domain libraries so that the resulting product can be freely distributed, and to improve the usability of such software by 1) supporting common file formats for the importation of statistical variables and image files, and 2) implementing a graphical user interface.
The specific aims of this project are to: (1) Develop freely available voxel-wise statistical analysis software independent of proprietary libraries. (2) Add utilities for importing statistical variables in common spreadsheet formats and XML (Extensible Markup Language). (3) Expand the number of allowable file formats for reading and writing image files. (4) Create a graphical user interface. (5) Write a user manual describing how to use our voxel-wise morphometric analysis software. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of Biomedical Imaging and Bioengineering (NIBIB)
Type
Small Research Grants (R03)
Project #
1R03EB008136-01
Application #
7362166
Study Section
Special Emphasis Panel (ZNS1-SRB-G (17))
Program Officer
Cohen, Zohara
Project Start
2007-09-24
Project End
2009-08-31
Budget Start
2007-09-24
Budget End
2009-08-31
Support Year
1
Fiscal Year
2007
Total Cost
$157,600
Indirect Cost
Name
Northern California Institute Research & Education
Department
Type
DUNS #
613338789
City
San Francisco
State
CA
Country
United States
Zip Code
94121
Cardenas, Valerie A; Tosun, Duygu; Chao, Linda L et al. (2014) Voxel-wise co-analysis of macro- and microstructural brain alteration in mild cognitive impairment and Alzheimer's disease using anatomical and diffusion MRI. J Neuroimaging 24:435-43
Naylor, Melissa G; Cardenas, Valerie A; Tosun, Duygu et al. (2014) Voxelwise multivariate analysis of multimodality magnetic resonance imaging. Hum Brain Mapp 35:831-46
Cardenas, Valerie A; Durazzo, Timothy C; Gazdzinski, Stefan et al. (2011) Brain morphology at entry into treatment for alcohol dependence is related to relapse propensity. Biol Psychiatry 70:561-7
Cardenas, Valerie A; Samuelson, Kristin; Lenoci, Maryann et al. (2011) Changes in brain anatomy during the course of posttraumatic stress disorder. Psychiatry Res 193:93-100
Cardenas, V A; Chao, L L; Studholme, C et al. (2011) Brain atrophy associated with baseline and longitudinal measures of cognition. Neurobiol Aging 32:572-80
Cardenas, V A; Meyerhoff, D J; Studholme, C et al. (2009) Evidence for ongoing brain injury in human immunodeficiency virus-positive patients treated with antiretroviral therapy. J Neurovirol 15:324-33