African trypanosomes (Trypanosoma brucei) are protozoan parasites that cause a fatal disease known as African sleeping sickness in humans and related diseases in animals. These diseases have devastating health and economic consequences. Pathogenesis of T. brucei is critically dependent on the phenomena of antigenic variation. During infection of the mammalian host the majority of the trypanosome population is destroyed by the immune response to the Variant Surface Glycoprotein (VSG) coat. In the process of antigenic variation, individual trypanosomes are able to switch the VSG gene that is expressed, from a repertoire of several hundred different VSG genes, and evade immune destruction. To be expressed, a VSG gene has to be located within a telomeric expression site (ES). However, there are approximately 20 ESs and only one is active at a time. The mechanism of selective expression and switching of silent copies of VSG is not entirely understood. Previous analysis indicates that regulation of a VSG ESs correlate with the presence of a uniquely modified DNA base, represented by the glycosylation of thymine residues and called base J. The association of J with transcriptional repression of telomeric VSG genes suggests its role in regulation of antigenic variation. We have recently shown that base J is also localized throughout the trypanosome genome enriched at regions flanking Pol II polycistronic transcription units (PTU). This suggest base J also plays a biological role in transcription initiation and termination in organisms where very little is understood concerning the regulation of Pol II transcription. The broad, long-term objectives of this proposal are to use the biochemical and genetic analyses of enzymes involved in J biosynthesis to advance our understanding of the mechanism and biology of J-function in T. brucei. These studies will contribute to a fundamental understanding of the molecular mechanisms of trypanosome gene expression, antigenic variation and pathogenesis. The potentially significant role of J to the survival of the parasite, and the absence of base J in their mammalian hosts, indicates attractive targets for the design of inhibitors with broad specificity and low toxicity. Enzymes and co-factors involved in J-biosynthesis would represent such targets. These studies may prove useful in identifying novel approaches to prevention, treatment and diagnosis of the debilitating and deadly diseases caused by these parasites.

Public Health Relevance

Parasitic protozoa are a major cause of global infectious disease and therefore represent a serious threat to public health. One such protozoan, Trypanosoma brucei, is the causative agent of African sleeping sickness in humans and Nagana, a wasting and fatal disease, in cattle and other farm animals. A limited number of drugs are available and most have high toxicity and emerging resistance. However, unless treated, African sleeping sickness is 100% fatal. We expect that our findings will be relevant to the mission of the NIH and be broadly interesting to researchers studying molecular mechanisms of gene expression,

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
High Priority, Short Term Project Award (R56)
Project #
2R56AI063523-07A1
Application #
8324772
Study Section
Pathogenic Eukaryotes Study Section (PTHE)
Program Officer
Mcgugan, Glen C
Project Start
2005-12-15
Project End
2013-08-31
Budget Start
2011-09-09
Budget End
2013-08-31
Support Year
7
Fiscal Year
2011
Total Cost
$383,950
Indirect Cost
Name
University of Georgia
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
004315578
City
Athens
State
GA
Country
United States
Zip Code
30602
Liu, Shuo; Ji, Debin; Cliffe, Laura et al. (2014) Quantitative mass spectrometry-based analysis of ?-D-glucosyl-5-hydroxymethyluracil in genomic DNA of Trypanosoma brucei. J Am Soc Mass Spectrom 25:1763-70
Bullard, Whitney; Lopes da Rosa-Spiegler, Jessica; Liu, Shuo et al. (2014) Identification of the glucosyltransferase that converts hydroxymethyluracil to base J in the trypanosomatid genome. J Biol Chem 289:20273-82
Reynolds, David; Cliffe, Laura; Förstner, Konrad U et al. (2014) Regulation of transcription termination by glucosylated hydroxymethyluracil, base J, in Leishmania major and Trypanosoma brucei. Nucleic Acids Res 42:9717-29
Cliffe, Laura J; Hirsch, Gwen; Wang, Jin et al. (2012) JBP1 and JBP2 proteins are Fe2+/2-oxoglutarate-dependent dioxygenases regulating hydroxylation of thymidine residues in trypanosome DNA. J Biol Chem 287:19886-95
Ekanayake, Dilrukshi K; Minning, Todd; Weatherly, Brent et al. (2011) Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA. Mol Cell Biol 31:1690-700
Cliffe, Laura J; Siegel, T Nicolai; Marshall, Marion et al. (2010) Two thymidine hydroxylases differentially regulate the formation of glucosylated DNA at regions flanking polymerase II polycistronic transcription units throughout the genome of Trypanosoma brucei. Nucleic Acids Res 38:3923-35
Cliffe, Laura J; Kieft, Rudo; Southern, Timothy et al. (2009) JBP1 and JBP2 are two distinct thymidine hydroxylases involved in J biosynthesis in genomic DNA of African trypanosomes. Nucleic Acids Res 37:1452-62