Application): This research proposal deals with the development of two highly parallelizable, fully three-dimensional reconstruction models with extensive applicability in the field of electron microscopy (EM) of crystals, based on the geometry of the 3D Torus. One of the imaging models proposed is aimed at the study of the atomic structure of crystals formed by atoms of more than one kind, by means of transmission EM. The present work is an enhancement to the previous successful model developed specifically for tomography of crystals endowed with a single kind of atom. The other tomography model allows the imaging of crystallized biological molecules and molecular aggregates and complexes, such as RNA, DNA, proteins and ribosomes, which can be crystallized. This work is fundamental in that it could permit the extraction of previously unobtainable structural and morphological information from the electron microscopy of biomolecules. Due to a robust signal-to-noise ratio, this reconstruction technique offers an additional advantage by requiring lower radiation doses than conventional methods, which could guarantee sample integrity by limiting the structural degradation in complex organic species. A comparative study of the quality and speed of the reconstruction will be performed on data obtained from crystallized specimens of current interest, taking into consideration the performance of other existing imaging models. As a byproduct of the proposed research, the investigators expect to produce software packages to be used in EM facilities, for both models. The long-term objective of this proposal is to create an image processing unit at the University of Puerto Rico, integrated to a multidisciplinary environment, aimed at assisting the needs of our researchers in the biomedical area.
| Ramírez-Camejo, Luis A; Maldonado-Morales, Génesis; Bayman, Paul (2017) Differential Microbial Diversity in Drosophila melanogaster: Are Fruit Flies Potential Vectors of Opportunistic Pathogens? Int J Microbiol 2017:8526385 |
| Morales-Rivera, Keyla F; Piñero Cruz, Dalice M; Prieto, Jose A (2017) Crystal structure of (-)-(S)-4-[(2S,3S,4S,Z)-3-hydroxy-4-methyl-hept-5-en-2-yl]-1,3-dioxolan-2-one. Acta Crystallogr E Crystallogr Commun 73:1070-1072 |
| García-Arriaga, Marilyn; Acosta-Santiago, Maxier; Cruz, Antony et al. (2017) Probing the Limits of Supramolecular G-Quadruplexes Using Atomistic Molecular Dynamics Simulations. Inorganica Chim Acta 468:209-222 |
| Huang, Qing; Quiñones, Edwin (2016) A spectroscopic method to determine the activity of the restriction endonuclease EcoRV that involves a single reaction. Anal Biochem 497:103-5 |
| Mège, Pascal; Schizas, Nikolaos V; Reyes, Joselyd García et al. (2015) Genetic seascape of the threatened Caribbean elkhorn coral, Acropora palmata, on the Puerto Rico Shelf. Mar Ecol (Berl) 36:195-209 |
| Morales-Rivera, Amarilys; Hernández-Burgos, Mayté M; Martínez-Rivera, Arlene et al. (2014) Anxiolytic effects of oxytocin in cue-induced cocaine seeking behavior in rats. Psychopharmacology (Berl) 231:4145-55 |
| Ramírez-Camejo, Luis A; Torres-Ocampo, Ana P; Agosto-Rivera, José L et al. (2014) An opportunistic human pathogen on the fly: strains of Aspergillus flavus vary in virulence in Drosophila melanogaster. Med Mycol 52:211-9 |
| Martínez-Rivera, Arlene; Rodríguez-Borrero, Enrique; Matías-Alemán, María et al. (2013) Metabotropic glutamate receptor 5 within nucleus accumbens shell modulates environment-elicited cocaine conditioning expression. Pharmacol Biochem Behav 110:154-60 |
| Galindo-Cardona, Alberto; Acevedo-Gonzalez, Jenny P; Rivera-Marchand, Bert et al. (2013) Genetic structure of the gentle Africanized honey bee population (gAHB) in Puerto Rico. BMC Genet 14:65 |
| Santiago-Rodriguez, Tasha M; Rivera, Jessica I; Coradin, Mariel et al. (2013) Antibiotic-resistance and virulence genes in Enterococcus isolated from tropical recreational waters. J Water Health 11:387-96 |
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