The Southeast Resource Center for Integrated Metabolomics (SECIM) integrates existing strengths to create a comprehensive resource for basic and clinical scientists to obtain state-of-the-art metabolomics data and analyses. The SECIM Administrative Core is directed by Prof Arthur Edison, who will provide oversight of the entire project. The SECIM Program Coordinator, Dr. Eric Milgram, will oversee day-to-day operations, manage and optimize the overall workflow, serve as the primary interface and point of contact with SECIM users, and provide technical assistance to the mass spectrometry technical cores 1 and 3. Dr. Milgram has 60% of his effort in this core and 40% in the Bioinformatics Core to provide a seamless interface between the SECIM user portal, pipeline, and analysis. The Administrative Core provides oversight to SECIM through the establishment of 3 standing committees: the SECIM-Executive Committee (SECIM-EC), the Internal Advisory Committee (lAC), and the External Advisory Committee (EAC). SECIM-EC is comprised of SECIM leadership and is responsible for operational and budgetary decisions. The lAC is comprised of faculty representatives from colleges or centers at UF who have a stake in SECIM and will provide input about services;this group also covers the vast majority of types of metabolomics applications, ranging from agriculture to basic science to clinical science. The EAC is comprised of international metabolomics experts who will advise on technical and strategic matters and challenge SECIM to constantly improve. The Administrative Core will also develop and implement a comprehensive business plan, designed to move SECIM into full cost recovery in years 6 and beyond. Alicia Turner is the SECIM Chief Business Development Officer, and she has developed a model that serves as the starting budget for SECIM. During the first 3 years of operation, Ms. Turner will improve the model as real user data are recorded and true costs determined. She will train a financial assistant, who will implement the model in a full cost recovery auxiliary in the CTSI in year 6.

Public Health Relevance

The major goal of metabolomics is the measurement and characterization of metabolites from living organisms, including people. Small molecule metabolites are sensitive to disease, treatment, and many environmental factors, and they can be used as indicators of disease in diagnosis or as markers to assess the outcome of treatment.

Project Start
Project End
Budget Start
2014-09-01
Budget End
2015-08-31
Support Year
2
Fiscal Year
2014
Total Cost
Indirect Cost
Name
University of Florida
Department
Type
DUNS #
City
Gainesville
State
FL
Country
United States
Zip Code
32611
Walejko, Jacquelyn M; Kim, Seungbum; Goel, Ruby et al. (2018) Gut microbiota and serum metabolite differences in African Americans and White Americans with high blood pressure. Int J Cardiol 271:336-339
Walejko, Jacquelyn M; Koelmel, Jeremy P; Garrett, Timothy J et al. (2018) Multi-omics Approach Reveals Metabolic Changes in the Heart at Birth. Am J Physiol Endocrinol Metab :
Wu, Cheng-Yang; Satapati, Santhosh; Gui, Wenjun et al. (2018) A novel inhibitor of pyruvate dehydrogenase kinase stimulates myocardial carbohydrate oxidation in diet-induced obesity. J Biol Chem 293:9604-9613
Chouinard, Christopher D; Cruzeiro, Vinicius Wilian D; Kemperman, Robin H J et al. (2018) Cation-Dependent Conformations in 25-Hydroxyvitamin D3-Cation Adducts Measured by Ion Mobility-Mass Spectrometry and Theoretical Modeling. Int J Mass Spectrom 432:1-8
Sirusi, Ali A; Suh, Eul Hyun; Kovacs, Zoltan et al. (2018) The effect of Ho3+ doping on 13C dynamic nuclear polarization at 5 T. Phys Chem Chem Phys 20:728-731
Costford, Sheila R; Brouwers, Bram; Hopf, Meghan E et al. (2018) Skeletal muscle overexpression of nicotinamide phosphoribosyl transferase in mice coupled with voluntary exercise augments exercise endurance. Mol Metab 7:1-11
Lewis, Samantha L; Holl, Heather M; Long, Maureen T et al. (2018) Use of principle component analysis to quantitatively score the equine metabolic syndrome phenotype in an Arabian horse population. PLoS One 13:e0200583
Ulmer, Candice Z; Jones, Christina M; Yost, Richard A et al. (2018) Optimization of Folch, Bligh-Dyer, and Matyash sample-to-extraction solvent ratios for human plasma-based lipidomics studies. Anal Chim Acta 1037:351-357
Zhao, Qi; Shen, Hui; Su, Kuan-Jui et al. (2018) A joint analysis of metabolomic profiles associated with muscle mass and strength in Caucasian women. Aging (Albany NY) 10:2624-2635
Lyon, Debra E; Starkweather, Angela; Yao, Yingwei et al. (2018) Pilot Study of Metabolomics and Psychoneurological Symptoms in Women With Early Stage Breast Cancer. Biol Res Nurs 20:227-236

Showing the most recent 10 out of 71 publications