Translational control of GCN4 expression is mediated by AUG codons present in the 5' leader of the transcript: the third or fourth AUG codon is needed for repression in non-starvation conditions; the first is required for derepression in starvation conditions. Positive (GCN) and negative (GCD) transacting factors modulate the interactions between these upstream AUG codons. We have made the following advances in our understanding of this translational control mechanism: (1) the regulatory functions of both the 5' proximal and 3' proximal AUG codons can be mimicked by heterologous upstream open-reading-frames (URFs), demonstrating a lack of strict sequence specificity for URF regulatory functions. However, placing UJRFl downstream from URFs 3-4 abolishes regulation, showing that important sequence differences exist between these elements and their 5'-3' order is critical. (2) Substitutions at URFl with sequences found at URF4 show that the coding region and sequences 3' to the stop codon distinguish the functions of URFs 1 and 4. These results suggest that ribosomes must first translate URFl and resume scanning to move beyond URFs 3-4 in derepressing conditions. (4) lacZ fusions to URFs 1, 3, and 4 are all efficiently translated when no upstream AUG codons are present. Moreover, URFs 1 and 2 have nearly the same weak inhibitory effect on translation of URF3-, URF4-, and GCN4-lacZ fusions, arguing against differential effects of URFs 1-2 on translation of URFs 3- 4 versus GCN4. (5) Immunoblotting with antisera raised against GCN3 and GCDl shows that these factors are expressed constitutively, supporting the notion that their functions are controlled by protein-protein interactions. (6) ggcd12 and gcd2- 1 mutations were shown to be alleles of the same gene that have allele-specific interactions with GCN3; the carboxyl-terminus of GCD2 was found to be homologous to GCN3. Based on these findings, it is likely that GCD2 contains two domains, one of which competes with GCN3. (7) Complementation mapping and DNA sequence analysis of GCN2 was completed; a mutation in a conserved lysine residue in the putative GCN2 protein kinase domain was shown to completely inactivate GCN2 positive regulatory function. (8) Mutations in the structural genes for two yeast eIF2 subunits (sui) behave like gcd mutations in causing derepressed GCN4 expression independent of the positive regulator GCN2.

Project Start
Project End
Budget Start
Budget End
Support Year
5
Fiscal Year
1988
Total Cost
Indirect Cost
Name
U.S. National Inst/Child Hlth/Human Dev
Department
Type
DUNS #
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Country
United States
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Garriz, Andres; Qiu, Hongfang; Dey, Madhusudan et al. (2009) A network of hydrophobic residues impeding helix alphaC rotation maintains latency of kinase Gcn2, which phosphorylates the alpha subunit of translation initiation factor 2. Mol Cell Biol 29:1592-607
Wong, Chi-Ming; Qiu, Hongfang; Hu, Cuihua et al. (2007) Yeast cap binding complex impedes recruitment of cleavage factor IA to weak termination sites. Mol Cell Biol 27:6520-31
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Martin-Marcos, Pilar; Hinnebusch, Alan G; Tamame, Mercedes (2007) Ribosomal protein L33 is required for ribosome biogenesis, subunit joining, and repression of GCN4 translation. Mol Cell Biol 27:5968-85
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Ron, David; Hinnebusch, Alan G (2006) Targeting translation in hypoxic tumors. ACS Chem Biol 1:145-8
Chen, Zhang-Qun; Dong, Jinsheng; Ishimura, Akihiko et al. (2006) The essential vertebrate ABCE1 protein interacts with eukaryotic initiation factors. J Biol Chem 281:7452-7

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