The advancement of protein labeling methodology is key to accelerating high-content microscopy technologies, expediting proteomic analyses, and expanding our tools to identify and monitor disease. This program examines the development of a reversible system to label selected proteins. Unlike conventional approaches, the proposed system adapts peptide-screening technologies as a tool to encode discrete selectivity within a two-stage enzymatic pair reaction. Selective labeling is dictated by the choice of labeling enzymes. The proposed program begins through the rational development of orthogonal tags by computational analysis. Evaluation of this system includes detailed kinetic analyses and applications for understanding protein complexes. Overall, this system opens new avenues in protein science. This program will provide a new method for rapidly labeling specific proteins within the complex compendium of proteins towards future studies within the cell or tissue.

Public Health Relevance

The ability to selectively label proteins is a key tool for disease diagnoses and therapeutic discovery. This program examines the development of a reversible system to selectively label discrete proteins using a two- stage on/off enzymatic labeling procedure. Unlike any labeling method developed to date, this system allows its users to attach and detach probes in order to understand protein function.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Predoctoral Individual National Research Service Award (F31)
Project #
1F31GM113470-01A1
Application #
8986312
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Brown, Patrick
Project Start
2015-07-01
Project End
2017-06-30
Budget Start
2015-07-01
Budget End
2016-06-30
Support Year
1
Fiscal Year
2015
Total Cost
Indirect Cost
Name
University of California San Diego
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Tallorin, Lorillee; Finzel, Kara; Nguyen, Quynh G et al. (2016) Trapping of the Enoyl-Acyl Carrier Protein Reductase-Acyl Carrier Protein Interaction. J Am Chem Soc 138:3962-5