18. GOALS FOR FELLOWSHIP TRAINING AND CAREER In Dr. Wu' s lab, I hope to learn more about the fundamental mechanisms of gene expression and the techniques used to study transvection in Drosophila. Although I gained experience with Drosophila as a graduate student, my studies were primarily focused on cell biology and signaling pathways that mediate development. In Dr. Wu's lab, I will learn modem Drosophila techniques that permit directed manipulation of the genome, such as transposon replacement and targeted gene conversion, which will be important tools for my future goals of understanding gene regulation and homolog pairing. Following my postdoctoral work, I hope to establish my own research group studying the regulatory mechanisms of gene expression and transvection. Thus, in addition to learning specific techniques and gaining a greater understanding of gene regulation, I also intend to learn more about establishing and running a successful research group, including experience in writing grant proposals, establishing collaborations, and mentoring. t-a.l_[.-_.il 19. NAMEANDDEGREE(S)Wu, Chao-ting, Ph.D. 20. POSITION/RANK Associate Professor 21. RESEARCH INTERESTS/AREAS Mechanisms of homologue interactions and epigenetic gene regulation -':1=[,:t__,I.-[o,i-'I -...I-[o]--z=}_'f_,_. 22. DESCRIPTION (Do not exceed space provided) The goal of this research is to understand how enhancers interact with their appropriate promoters. Because promiscuous activity of enhancers can lead to inappropriate expression of regulatory and developmental genes leading to disease, it is important that we understand how enhancers normally identify their relevant transcriptional units. To approach this question, we will use Drosophila to study a process called transvection, wherein an enhancer on one chromosome can activate a homolog in trans when the two sequences are allowed to pair. Although transvection has been observed for several genes, it is unknown whether the ability to activate genes on a homologous chromosome is a general property of enhancers. We will address this question by testing well-characterized enhancer elements for their ability to support transvection. A second goal of the research is to identify other genes that help regulate transvection. Thus, we will take advantage of the powerful genetics tools afforded by Drosophila and screen the genome for mutations that fail to support transvection. Since transvection requires that homologous chromosomes be paired, these studies should also shed light on other homology-dependent processes, such as imprinting and homology-dependent gene silencing, which have been implicated in genetic diseases and potential gene therapeutics respectively. PHS 416-1 (Rev. 12/98) Form Page 2 BB cc Individual NRSA Application NAME (Last, first, middle initial) Table of Contents ========================================Section End===========================================
| Griffin, Ruth; Sustar, Anne; Bonvin, Marianne et al. (2009) The twin spot generator for differential Drosophila lineage analysis. Nat Methods 6:600-2 |
| Bateman, Jack R; Wu, C-ting (2008) A simple polymerase chain reaction-based method for the construction of recombinase-mediated cassette exchange donor vectors. Genetics 180:1763-6 |
| Bateman, Jack R; Wu, C-ting (2008) A genomewide survey argues that every zygotic gene product is dispensable for the initiation of somatic homolog pairing in Drosophila. Genetics 180:1329-42 |
| Williams, Benjamin R; Bateman, Jack R; Novikov, Natasha D et al. (2007) Disruption of topoisomerase II perturbs pairing in drosophila cell culture. Genetics 177:31-46 |
| Bateman, Jack R; Lee, Anne M; Wu, C-ting (2006) Site-specific transformation of Drosophila via phiC31 integrase-mediated cassette exchange. Genetics 173:769-77 |
