Mature microRNAs (miRNA) are small, noncoding RNAs that post-transcriptionally regulate gene expression. Though miRNAs are essential for many fundamental cell processes, the mechanisms regulating miRNA biogenesis are poorly understood. miRNA biogenesis is a multi-step process in which long, genetically-encoded primary miRNAs are cleaved into precursor and then mature miRNAs. Each step is important for mature miRNA expression, and thus represents targets for regulation or therapeutics. I propose to study the control mechanisms for miRNA biogenesis in general and let-7 in particular in a genetically rich host - C. elegans. Let-7 is an important tumorigenesis regulator that is conserved across phyla. Though proper let-7 levels are crucial for appropriate cell growth, the fundamental mechanisms underlying let-7 expression specifically and miRNA biogenesis in general are not well understood. I have identified a new function for the period protein homolog LIN-42 in post-transcriptionally regulating let-7 biogenesis by a novel mechanism. My studies will determine if LIN-42 globally regulates mature miRNA production, and elucidate the mechanism whereby LIN-42 performs this novel and important function. Ultimately, these studies will increase our understanding of the development and microRNA biogenesis pathways, and may illuminate a novel function of period proteins and important links between microRNA biogenesis regulation, biological timing mechanisms and tumorigenesis. Public Health Relevance: microRNAs are essential for many fundamental cell processes, and misregulation of miRNA expression often results in tumorigenesis. Unraveling the mechanisms controlling miRNA biogenesis will provide insight into the fundamental processes regulating tumorigenesis while highlighting pathways containing novel targets for cancer therapy and prevention.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32GM087004-02
Application #
7858374
Study Section
Special Emphasis Panel (ZRG1-F05-K (20))
Program Officer
Carter, Anthony D
Project Start
2009-06-01
Project End
2010-08-31
Budget Start
2010-06-01
Budget End
2010-08-31
Support Year
2
Fiscal Year
2010
Total Cost
$11,966
Indirect Cost
Name
University of California San Diego
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Van Wynsberghe, Priscilla M; Finnegan, Emily F; Stark, Thomas et al. (2014) The Period protein homolog LIN-42 negatively regulates microRNA biogenesis in C. elegans. Dev Biol 390:126-35
Van Wynsberghe, Priscilla M; Chan, Shih-Peng; Slack, Frank J et al. (2011) Analysis of microRNA expression and function. Methods Cell Biol 106:219-252
Van Wynsberghe, Priscilla M; Kai, Zoya S; Massirer, Katlin B et al. (2011) LIN-28 co-transcriptionally binds primary let-7 to regulate miRNA maturation in Caenorhabditis elegans. Nat Struct Mol Biol 18:302-8
Bracht, John R; Van Wynsberghe, Priscilla M; Mondol, Vanessa et al. (2010) Regulation of lin-4 miRNA expression, organismal growth and development by a conserved RNA binding protein in C. elegans. Dev Biol 348:210-21