The mechano-sensitive ion channel of M. tuberculosis is a prototypical ion channel of known structure. Despite extensive research efforts, the mechanism by which ion channels conduct ions in response to an activating stimulus is poorly understood. It is the goal of this research to use chemically-synthetic access to the family of mechano-sensitive channels to determine the physical mechanism of channel assembly, conduction and gating. Working in a program project will uniquely complement our chemical synthetic skills with premier ion channel assay expertise. The long-term aim of this research is twofold. Firstly, the development of general, robust methods for the chemical synthesis, biophysical study and manipulation of small membrane proteins. Secondly, to gain unprecedented insight into the mechanistic aspects of ion channel conduction and gating in general. Such understanding will contribute to the design and evaluation of more effective drugs targeted to ion channels. The specific studies envisioned in this proposal can be divided into four categories: 1. Robust total chemical synthesis and reconstitution of MscL (151 amino acids, 16 Kd) 2. Thermodynamics of channel assembly 3. Dynamic structure-function study of channel gating 4. Channels with novel properties In each of these areas we will apply the tools of chemistry to membrane proteins in hitherto unprecedented ways. The understanding arrived at will be tested by the synthesis of non-native ion channel constructs, and channels with modified gating properties as well as novel selectivities.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Program Projects (P01)
Project #
5P01GM062532-02
Application #
6491847
Study Section
Special Emphasis Panel (ZRG1)
Project Start
2001-09-01
Project End
2002-08-31
Budget Start
Budget End
Support Year
2
Fiscal Year
2001
Total Cost
Indirect Cost
Name
California Institute of Technology
Department
Type
DUNS #
078731668
City
Pasadena
State
CA
Country
United States
Zip Code
91125
Elmore, Donald E (2010) Bringing ion channel crystal structures into sharper focus with computer modeling: examples from mechanosensitive channels. Future Med Chem 2:909-13
Maurer, Joshua A; Elmore, Donald E; Clayton, Daniel et al. (2008) Confirming the revised C-terminal domain of the MscL crystal structure. Biophys J 94:4662-7
Maurer, Joshua A; White, Victor E; Dougherty, Dennis A et al. (2007) Reconstitution of ion channels in agarose-supported silicon orifices. Biosens Bioelectron 22:2577-84
Spronk, Steven A; Elmore, Donald E; Dougherty, Dennis A (2006) Voltage-dependent hydration and conduction properties of the hydrophobic pore of the mechanosensitive channel of small conductance. Biophys J 90:3555-69
Kochendoerfer, Gerd G; Clayton, Daniel; Becker, Christian (2005) Chemical synthesis approaches to the engineering of ion channels. Protein Pept Lett 12:737-41
Kochendoerfer, Gerd G; Jones, David H; Lee, Sangwon et al. (2004) Functional characterization and NMR spectroscopy on full-length Vpu from HIV-1 prepared by total chemical synthesis. J Am Chem Soc 126:2439-46
Clayton, Daniel; Shapovalov, George; Maurer, Joshua A et al. (2004) Total chemical synthesis and electrophysiological characterization of mechanosensitive channels from Escherichia coli and Mycobacterium tuberculosis. Proc Natl Acad Sci U S A 101:4764-9
Becker, Christian F W; Strop, Pavel; Bass, Randal B et al. (2004) Conversion of a mechanosensitive channel protein from a membrane-embedded to a water-soluble form by covalent modification with amphiphiles. J Mol Biol 343:747-58
Becker, Christian F W; Clayton, Daniel; Shapovalov, George et al. (2004) On-resin assembly of a linkerless lanthanide(III)-based luminescence label and its application to the total synthesis of site-specifically labeled mechanosensitive channels. Bioconjug Chem 15:1118-24
Shapovalov, George; Lester, Henry A (2004) Gating transitions in bacterial ion channels measured at 3 microns resolution. J Gen Physiol 124:151-61

Showing the most recent 10 out of 19 publications