This subproject is one of many research subprojects utilizing theresources provided by a Center grant funded by NIH/NCRR. The subproject andinvestigator (PI) may have received primary funding from another NIH source,and thus could be represented in other CRISP entries. The institution listed isfor the Center, which is not necessarily the institution for the investigator.Phages are classified mainly by their morphology, but an evolutionary relationship of all tailed phages is well known. The virions of Bacteriophage Sf6, HK620, HS and APSE-2 resemble to those of phage P22 with an exception of one structural protein. The length of the cell penetrating tail needle gp26 significantly varies among homologs in these virions. The tail needle gp26 in phages is functionally equivalent to the well characterized tail needle of phage P22, mediating viral DNA injection in to host cells. It is plausible, despite having same functional role; modes of penetration and DNA injection through lipid bilayer could be substantially different across homologs. Using CHESS facility, we have recently solved a 2.1A X-ray structure of P22 gp26, providing structural basis for penetration and DNA injection. To enrich our understanding about phage DNA injection mechanisms we have done a recombinant expression of all gp26 homologs from Sf6, HK620, HS and APSE-2 in E. coli as a soluble protein. All gp26 homologs from various phages were purified to homogeneity. A preliminary characterization has been carried out using various biophysical techniques. For structural studies gp26 homologs were concentrated to 4-7 mg/ml and used to set up Sigma-Aldrich Crystal Screen using hanging drop vapour diffussion method. For HK620 gp26, the best crystals were obtained at pH 9.0 using TAPS as crystallization buffer and either 12-16% PEG 8000 or 16-26% PEG 4000 in the presence of 0.1 M ammonium sulfate. In both cases gp26 crystals grew within two week at 293 K to reach maximum dimensions of 50 x 100 x 500 m. Using similar screen, we got positive hits for SF6 and HS gp26 as well, and we are in the process of optimizing conditions by varying PEGs to achieve morphologically better looking crystals.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
2P41RR001646-26
Application #
7721318
Study Section
Special Emphasis Panel (ZRG1-BCMB-E (40))
Project Start
2008-08-01
Project End
2009-06-30
Budget Start
2008-08-01
Budget End
2009-06-30
Support Year
26
Fiscal Year
2008
Total Cost
$20,871
Indirect Cost
Name
Cornell University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
872612445
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
Ménade, Marie; Kozlov, Guennadi; Trempe, Jean-François et al. (2018) Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations. J Biol Chem 293:12832-12842
Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
Dean, Dexter N; Rana, Pratip; Campbell, Ryan P et al. (2018) Propagation of an A? Dodecamer Strain Involves a Three-Step Mechanism and a Key Intermediate. Biophys J 114:539-549
Chen, Yu Seby; Kozlov, Guennadi; Fakih, Rayan et al. (2018) The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+ efflux activity. J Biol Chem 293:19998-20007
Xu, Caishuang; Kozlov, Guennadi; Wong, Kathy et al. (2016) Crystal Structure of the Salmonella Typhimurium Effector GtgE. PLoS One 11:e0166643
Cogliati, Massimo; Zani, Alberto; Rickerts, Volker et al. (2016) Multilocus sequence typing analysis reveals that Cryptococcus neoformans var. neoformans is a recombinant population. Fungal Genet Biol 87:22-9
Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60

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