The misfolding of IAPP (islet amyloid polypeptide) is thought to play an important role in type II diabetes and is analogous to that of other proteins involved in other age-related amyloid diseases, including Alzheimer and Parkinson disease. However, structural details of this misfolding process have been difficult to obtain. Recent work, largely from my group, demonstrates that site-directed spin labeling (SDSL) is a powerful approach for investigating the structures of amyloidogenic proteins. In this proposed study, we will use SDSL to provide detailed structural information on defined conformational states involved in IAPP misfolding, and we will try to determine how small molecule inhibitors can prevent those structures from forming.
Specific Aim 1 is designed to generate a three-dimensional model of IAPP amyloid fibrils. Amyloid fibrils are the pathological hallmarks of amyloid diseases and represent the end product of a stepwise misfolding process. Understanding the molecular mechanism of amyloid protein misfolding will not be possible without detailed knowledge of the fibrillar structures.
In Specific Aim 2, we propose to perform structural studies on ?-helical, membrane-bound IAPP in order to provide a mechanistic understanding of our previous finding that such membrane interactions can catalyze the misfolding of IAPP.
In Specific Aim 3, we propose to provide detailed structural information on non-fibrillar, cytotoxic oligomers of IAPP. Importantly, these well-defined oligomers have been identified in vivo, and are thought to play an important role in amyloid diseases, including type II diabetes.
In Specific Aim 4, we will utilize our SDSL approach, combined with the structural information from Specific Aims 1-3, to study how small molecule inhibitors interact with IAPP and prevent misfolding. Relevance: The structural and mechanistic information obtained from Specific Aims 1-4 should greatly facilitate the development of therapeutic agents for the treatment of type II diabetes and other amyloid diseases, including Alzheimer and Parkinson disease. In addition, our studies should make it possible to design mutants that selectively alter misfolding. Such mutants would provide powerful tools for studying the cellular targets and mechanisms of toxicity of misfolded amyloid proteins in vivo.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Project (R01)
Project #
5R01AG027936-04
Application #
7794847
Study Section
Biochemistry and Biophysics of Membranes Study Section (BBM)
Program Officer
Velazquez, Jose M
Project Start
2007-02-15
Project End
2012-01-31
Budget Start
2010-02-15
Budget End
2011-01-31
Support Year
4
Fiscal Year
2010
Total Cost
$291,773
Indirect Cost
Name
University of Southern California
Department
Biochemistry
Type
Schools of Medicine
DUNS #
072933393
City
Los Angeles
State
CA
Country
United States
Zip Code
90089
Okada, Alan K; Teranishi, Kazuki; Isas, J Mario et al. (2016) Diabetic Risk Factors Promote Islet Amyloid Polypeptide Misfolding by a Common, Membrane-mediated Mechanism. Sci Rep 6:31094
Cheng, Chi-Yuan; Varkey, Jobin; Ambroso, Mark R et al. (2013) Hydration dynamics as an intrinsic ruler for refining protein structure at lipid membrane interfaces. Proc Natl Acad Sci U S A 110:16838-43
Costes, Safia; Langen, Ralf; Gurlo, Tatyana et al. (2013) ?-Cell failure in type 2 diabetes: a case of asking too much of too few? Diabetes 62:327-35
Li, Yiyu; Hatmal, Ma'mon M; Langen, Ralf et al. (2012) Idealized models of protofilaments of human islet amyloid polypeptide. J Chem Inf Model 52:2983-91
Ladiwala, Ali Reza A; Bhattacharya, Moumita; Perchiacca, Joseph M et al. (2012) Rational design of potent domain antibody inhibitors of amyloid fibril assembly. Proc Natl Acad Sci U S A 109:19965-70
Meier, Franziska; Abeywardana, Tharindumala; Dhall, Abhinav et al. (2012) Semisynthetic, site-specific ubiquitin modification of ?-synuclein reveals differential effects on aggregation. J Am Chem Soc 134:5468-71
Bedrood, Sahar; Li, Yiyu; Isas, J Mario et al. (2012) Fibril structure of human islet amyloid polypeptide. J Biol Chem 287:5235-41
Hatmal, Ma'mon M; Li, Yiyu; Hegde, Balachandra G et al. (2012) Computer modeling of nitroxide spin labels on proteins. Biopolymers 97:35-44
Zhang, Qi Charles; Yeh, Tzu-lan; Leyva, Alfonso et al. (2011) A compact beta model of huntingtin toxicity. J Biol Chem 286:8188-96
Ladner, Carol L; Chen, Min; Smith, David P et al. (2010) Stacked sets of parallel, in-register beta-strands of beta2-microglobulin in amyloid fibrils revealed by site-directed spin labeling and chemical labeling. J Biol Chem 285:17137-47

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