We propose to use mutant enzymes for gene therapy of human cancer, both to ablate tumors and to protect bone marrow during chemotherapy. We have established techniques for creating new mutant enzymes by coupling random nucleotide mutagenesis with genetic selection for enzymes with altered substrate specificities. We will use this technology to create mutant enzymes with desired properties for cancer gene therapy, and will test their efficacity in a variety of experimental systems. We will pursue four strategies that target different steps in DNA metabolism. We have established a selection system to identify mutant thymidylate synthases that are resistant to 5-fluorouracil, to be used for protection of bone marrow during therapy with this commonly employed agent. We have identified mutant DNA methyltransferases that are more active than the wild type, and are resistant to the inhibitor benzylguanine, to be used to increase the resistance of bone marrow precursor cells to alkylating agents. We will evaluate whether mutant DNA polymerase beta's can serve to enhance replication bypass and thereby increase the tolerance of bone marrow cells for unrepaired lesions that block DNA synthesis. We have established a large library of mutant herpes thymidine kinases that preferentially phosphorylate nucleoside analogs. These mutant thymidine kinases sensitize mammalian cells to the lethal effects of gancyclovir and acyclovir to a greater extent than the wild type enzyme, and will be tested for efficacity in tumor ablation.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA078885-04
Application #
6377217
Study Section
Chemical Pathology Study Section (CPA)
Project Start
1998-08-01
Project End
2003-05-31
Budget Start
2001-06-05
Budget End
2002-05-31
Support Year
4
Fiscal Year
2001
Total Cost
$440,434
Indirect Cost
Name
University of Washington
Department
Pathology
Type
Schools of Medicine
DUNS #
135646524
City
Seattle
State
WA
Country
United States
Zip Code
98195
Prindle, Marc J; Fox, Edward J; Loeb, Lawrence A (2010) The mutator phenotype in cancer: molecular mechanisms and targeting strategies. Curr Drug Targets 11:1296-303
Bielas, Jason H; Schmitt, Michael W; Icreverzi, Amalia et al. (2009) Molecularly evolved thymidylate synthase inhibits 5-fluorodeoxyuridine toxicity in human hematopoietic cells. Hum Gene Ther 20:1703-7
Fox, Edward J; Salk, Jesse J; Loeb, Lawrence A (2009) Cancer genome sequencing--an interim analysis. Cancer Res 69:4948-50
Chen, Cheng-Yao; Guo, Haiwei H; Shah, Dharini et al. (2008) Substrate binding pocket residues of human alkyladenine-DNA glycosylase critical for methylating agent survival. DNA Repair (Amst) 7:1731-45
Loeb, Lawrence A; Bielas, Jason H; Beckman, Robert A (2008) Cancers exhibit a mutator phenotype: clinical implications. Cancer Res 68:3551-7;discussion 3557
Venkatesan, Ranga N; Treuting, Piper M; Fuller, Evan D et al. (2007) Mutation at the polymerase active site of mouse DNA polymerase delta increases genomic instability and accelerates tumorigenesis. Mol Cell Biol 27:7669-82
Bielas, Jason H; Loeb, Keith R; Rubin, Brian P et al. (2006) Human cancers express a mutator phenotype. Proc Natl Acad Sci U S A 103:18238-42
Beckman, Robert A; Loeb, Lawrence A (2006) Efficiency of carcinogenesis with and without a mutator mutation. Proc Natl Acad Sci U S A 103:14140-5
Beckman, Robert A; Loeb, Lawrence A (2005) Negative clonal selection in tumor evolution. Genetics 171:2123-31
Camps, Manel; Loeb, Lawrence A (2005) Critical role of R-loops in processing replication blocks. Front Biosci 10:689-98

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