In most eukaryotic cells (including yeast and humans), the essential iron containing cofactors, heme and Fe-S clusters, are synthesized within mitochondria. Since the mitochondrial inner membrane must be impermeable to ions, a compartmentation problem is created - how does iron cross the mitochondrial membrane? We identified mutants of proteins of the mitochondrial carrier family that showed major and contrasting effects on iron distribution. Mrs3/mrs4 double mutants showed iron accumulation in the cytoplasm at the expense of mitochondria; Yhm1 mutants showed an opposite pattern, with iron accumulation in mitochondria at the expense of the cytoplasm. In our first aim, we will examine the effects of loss of function or overexpression of these mitochondrial carriers on iron import and export from mitochondria. Initial studies will be indirect, emphasizing effects on cellular iron uptake, iron partitioning and the status of iron proteins in different cellular compartments. Analysis of site directed mutants will correlate critical sequence motifs of the carrier proteins with the cellular phenotypes. In the second aim, a more direct assay for uptake of iron into mitochondria for heme synthesis has been developed and additional assays of iron transport (in and out) are being developed; these will be used to assess transport functions of these transporters in permeabilized cells in situ.
The final aim will be to find other genes/proteins involved in transfer of iron from cytosol to mitochondria. A genome wide screen for mutations that lead to misregulated iron uptake will be undertaken. Synthetic lethal relationships between mrs3/4 or yhm1 and other genes may reveal new components of intracellular iron trafficking pathways. The organization of mitochondria is highly conserved with humans, and mitochondrial carrier proteins, including Mrs3/4 and Yhm1 have human orthologs. Therefore these studies will have implications for human diseases in which iron homeostasis plays a role, such as anemia and neurodegeneration.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK053953-10
Application #
7219527
Study Section
Metallobiochemistry Study Section (BMT)
Program Officer
Wright, Daniel G
Project Start
1998-07-01
Project End
2008-04-30
Budget Start
2007-05-01
Budget End
2008-04-30
Support Year
10
Fiscal Year
2007
Total Cost
$314,052
Indirect Cost
Name
University of Pennsylvania
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Rocha, Agostinho G; Knight, Simon A B; Pandey, Alok et al. (2018) Cysteine desulfurase is regulated by phosphorylation of Nfs1 in yeast mitochondria. Mitochondrion 40:29-41
Dzul, Stephen P; Rocha, Agostinho G; Rawat, Swati et al. (2017) In vitro characterization of a novel Isu homologue from Drosophila melanogaster for de novo FeS-cluster formation. Metallomics 9:48-60
Rocha, Agostinho G; Knight, Simon A B; Pandey, Alok et al. (2017) Nfs1 cysteine desulfurase protein complexes and phosphorylation sites as assessed by mass spectrometry. Data Brief 15:775-799
Pain, Debkumar; Dancis, Andrew (2016) Roles of Fe-S proteins: from cofactor synthesis to iron homeostasis to protein synthesis. Curr Opin Genet Dev 38:45-51
Rodrigues, Andria V; Kandegedara, Ashoka; Rotondo, John A et al. (2015) Iron loading site on the Fe-S cluster assembly scaffold protein is distinct from the active site. Biometals 28:567-76
Cook, Jeremy D; Kondapalli, Kalyan C; Rawat, Swati et al. (2010) Molecular details of the yeast frataxin-Isu1 interaction during mitochondrial Fe-S cluster assembly. Biochemistry 49:8756-65
Amutha, Boominathan; Gordon, Donna M; Dancis, Andrew et al. (2009) Chapter 14 Nucleotide-dependent iron-sulfur cluster biogenesis of endogenous and imported apoproteins in isolated intact mitochondria. Methods Enzymol 456:247-66
Amutha, Boominathan; Gordon, Donna M; Gu, Yajuan et al. (2008) GTP is required for iron-sulfur cluster biogenesis in mitochondria. J Biol Chem 283:1362-71
Kondapalli, Kalyan C; Kok, Nicole M; Dancis, Andrew et al. (2008) Drosophila frataxin: an iron chaperone during cellular Fe-S cluster bioassembly. Biochemistry 47:6917-27
Zhang, Yan; Lyver, Elise R; Nakamaru-Ogiso, Eiko et al. (2008) Dre2, a conserved eukaryotic Fe/S cluster protein, functions in cytosolic Fe/S protein biogenesis. Mol Cell Biol 28:5569-82

Showing the most recent 10 out of 29 publications