Microbial biofilms play an important role in the pathogenesis of various human diseases. Biofilm formation on biomedical devices and implants frequently leads to device failure. Controlling the biofilm growth that leads to disease requires an improved understanding of biofilm development, which in turn requires novel methods of characterizing intact biofilms. Common anti-microbial control strategies such as antibiotics are typically limited in their efficacy at inhibiting or removing biofilms. Quorum sensing species and a wide variety of metabolites exist within biofilms and generally fall within the 2000 Da size range, as do antimicrobial treatments and biomaterial degradation products. The proposed work will develop chemical derivatization, laser desorption postionization mass spectrometry (LDPI-MS), depth profiling, and related methods for the detection of small (<2000 Da) molecular analytes within intact microbial biofilms while preserving information on the spatial distribution of those analytes. Hypothesis: Improved methods of imaging MS of small molecules will lead to improved strategies for the inhibition of bacterial biofilm growth that leads to infections on medical devices and in tissue. Novel imaging MS methods will be developed to probe the resistance of bacterial biofilms to antibiotics and other antimicrobial strategies. The studies will be performed on antibiotic spiked multilayer model films and Staphylococcus epidermidis biofilms. S. epidermidis is a gram positive organism often associated with catheter and hospital infections. It is also biosafety level 1 and therefore can be freely transported and studied at the various laboratories participating in this project. ? ? Specific Aim 1: Demonstrate antibiotic and peptide depth profiling on model films. ? Specific Aim 2: Probe antibiotic resistance in S. epidermidis biofilms. ? Specific Aim 3: Probe RIP inhibition of S. epidermidis biofilm growth. ? Specific Aim 4: Probe chitosan inhibition of biofilm growth. ? ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of Biomedical Imaging and Bioengineering (NIBIB)
Type
Research Project (R01)
Project #
1R01EB006532-01A1
Application #
7300770
Study Section
Enabling Bioanalytical and Biophysical Technologies Study Section (EBT)
Program Officer
Lee, Albert
Project Start
2007-07-16
Project End
2011-04-30
Budget Start
2007-07-16
Budget End
2008-04-30
Support Year
1
Fiscal Year
2007
Total Cost
$354,629
Indirect Cost
Name
University of Illinois at Chicago
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
098987217
City
Chicago
State
IL
Country
United States
Zip Code
60612
Cui, Yang; Hanley, Luke (2015) ChiMS: Open-source instrument control software platform on LabVIEW for imaging/depth profiling mass spectrometers. Rev Sci Instrum 86:065106
Akhmetov, Artem; Bhardwaj, Chhavi; Hanley, Luke (2015) Laser desorption postionization mass spectrometry imaging of biological targets. Methods Mol Biol 1203:185-94
Bernstein, Hans C; Carlson, Ross P (2014) Design, construction, and characterization methodologies for synthetic microbial consortia. Methods Mol Biol 1151:49-68
Bhardwaj, Chhavi; Cui, Yang; Hofstetter, Theresa et al. (2013) Differentiation of microbial species and strains in coculture biofilms by multivariate analysis of laser desorption postionization mass spectra. Analyst 138:6844-51
Bhardwaj, Chhavi; Moore, Jerry F; Cui, Yang et al. (2013) Laser desorption VUV postionization MS imaging of a cocultured biofilm. Anal Bioanal Chem 405:6969-77
Cui, Yang; Moore, Jerry F; Milasinovic, Slobodan et al. (2012) Depth profiling and imaging capabilities of an ultrashort pulse laser ablation time of flight mass spectrometer. Rev Sci Instrum 83:093702
Blaze M T, Melvin; Akhmetov, Artem; Aydin, Berdan et al. (2012) Quantification of antibiotic in biofilm-inhibiting multilayers by 7.87 eV laser desorption postionization MS imaging. Anal Chem 84:9410-5
Milasinovic, Slobodan; Liu, Yaoming; Bhardwaj, Chhavi et al. (2012) Feasibility of depth profiling of animal tissue by ultrashort pulse laser ablation. Anal Chem 84:3945-51
Bernstein, Hans C; Paulson, Steven D; Carlson, Ross P (2012) Synthetic Escherichia coli consortia engineered for syntrophy demonstrate enhanced biomass productivity. J Biotechnol 157:159-66
Bernstein, Hans C; Carlson, Ross P (2012) Microbial Consortia Engineering for Cellular Factories: in vitro to in silico systems. Comput Struct Biotechnol J 3:e201210017

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