The goal of the proposed research is to develop novel fluorescence techniques and use them n concert with other experimental approaches to elucidate the structure and dynamics of selected proteins in vitro and in intact cells. (1) We will carry out fluorescence studies of monoclonal mouse immunoglobulins to gain insight into how the binding of antigen leads to effector responses such as the activation of complement and the triggering of lymphocytes. The segmental flexibility of anti-dansyl immunoglobulins M, D, G, E, and A will be measured by nanosecond fluorescence polarization spectroscopy. The F(c) unit will be specifically labeled with fluorescent probes to detect propagated conformational changes. Membrane-bound immunoglobulins in intact cells and reconstituted vesicles will be studied by fluorescence techniques. (2) We will continue our x-ray and neutron crystallographic studies of gramicidin A. The goal now is to solve the structure of this channel at atomic resolution. (3) We will construct a time-resolved fluorescence polarization apparatus with a resolution-time of about 10 psec. The picosecond dynamics of a series of proteins containing a single tryptophan residue will be investigated and related to the function of these molecules. This synch-pumped laser and streak camera instrument will also be used for fluorescence microscopic analyses of single cells. (4) Fluorescence energy transfer and polarization techniques will be used to monitor the assembly and turnover of actin filaments in intact cells during processes such as cell division.
The aim i s to understand the control of the dynamics of actin filaments and their interactions with membranes. The proposed research will provide fundamental information about protein dynamics in processes such as ion transport, immune recognition, and cell motility and lead to new methods for the analysis of assemblies in intact cells.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM024032-10
Application #
3272023
Study Section
(SSS)
Project Start
1979-01-01
Project End
1987-03-31
Budget Start
1986-04-01
Budget End
1987-03-31
Support Year
10
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Stanford University
Department
Type
Schools of Medicine
DUNS #
800771545
City
Stanford
State
CA
Country
United States
Zip Code
94305
Tanaka, T; Ames, J B; Kainosho, M et al. (1998) Differential isotype labeling strategy for determining the structure of myristoylated recoverin by NMR spectroscopy. J Biomol NMR 11:135-52
Baldwin, A N; Ames, J B (1998) Core mutations that promote the calcium-induced allosteric transition of bovine recoverin. Biochemistry 37:17408-19
Ames, J B; Tanaka, T; Stryer, L et al. (1996) Portrait of a myristoyl switch protein. Curr Opin Struct Biol 6:432-8
Boniface, J J; Lyons, D S; Wettstein, D A et al. (1996) Evidence for a conformational change in a class II major histocompatibility complex molecule occurring in the same pH range where antigen binding is enhanced. J Exp Med 183:119-26
Zozulya, S; Ladant, D; Stryer, L (1995) Expression and characterization of calcium-myristoyl switch proteins. Methods Enzymol 250:383-93
Ames, J B; Porumb, T; Tanaka, T et al. (1995) Amino-terminal myristoylation induces cooperative calcium binding to recoverin. J Biol Chem 270:4526-33
Ames, J B; Tanaka, T; Ikura, M et al. (1995) Nuclear magnetic resonance evidence for Ca(2+)-induced extrusion of the myristoyl group of recoverin. J Biol Chem 270:30909-13
Ladant, D (1995) Calcium and membrane binding properties of bovine neurocalcin delta expressed in Escherichia coli. J Biol Chem 270:3179-85
Shopes, B (1995) Temperature-dependent binding of IgG1 to a human high affinity Fc receptor. Mol Immunol 32:375-8
Hanson, P I; Meyer, T; Stryer, L et al. (1994) Dual role of calmodulin in autophosphorylation of multifunctional CaM kinase may underlie decoding of calcium signals. Neuron 12:943-56

Showing the most recent 10 out of 35 publications