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Roy, Sushmita; Werner-Washburne, Margaret; Lane, Terran (2011) A multiple network learning approach to capture system-wide condition-specific responses. Bioinformatics 27:1832-8
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Roy, Sushmita; Lane, Terran; Werner-Washburne, Margaret (2009) Learning structurally consistent undirected probabilistic graphical models. Proc Int Conf Mach Learn 382:905-912
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Roy, Sushmita; Martinez, Diego; Platero, Harriett et al. (2009) Exploiting amino acid composition for predicting protein-protein interactions. PLoS One 4:e7813
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Aragon, Anthony D; Rodriguez, Angelina L; Meirelles, Osorio et al. (2008) Characterization of differentiated quiescent and nonquiescent cells in yeast stationary-phase cultures. Mol Biol Cell 19:1271-80
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Aragon, Anthony D; Quinones, Gabriel A; Thomas, Edward V et al. (2006) Release of extraction-resistant mRNA in stationary phase Saccharomyces cerevisiae produces a massive increase in transcript abundance in response to stress. Genome Biol 7:R9
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Roy, Sushmita; Lane, Terran; Allen, Chris et al. (2006) A hidden-state Markov model for cell population deconvolution. J Comput Biol 13:1749-74
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Aragon, Anthony D; Quinones, Gabriel A; Allen, Chris et al. (2006) An automated, pressure-driven sampling device for harvesting from liquid cultures for genomic and biochemical analyses. J Microbiol Methods 65:357-60
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Allen, Chris; Buttner, Sabrina; Aragon, Anthony D et al. (2006) Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures. J Cell Biol 174:89-100
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Timlin, Jerilyn A; Haaland, David M; Sinclair, Michael B et al. (2005) Hyperspectral microarray scanning: impact on the accuracy and reliability of gene expression data. BMC Genomics 6:72
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Sinclair, Michael B; Timlin, Jerilyn A; Haaland, David M et al. (2004) Design, construction, characterization, and application of a hyperspectral microarray scanner. Appl Opt 43:2079-88
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Showing the most recent 10 out of 11 publications
