The environmental element selenium (Se) is essential for human health in small amounts, but toxic at high levels. There is strong evidence that even small changes in Se status have multi-faceted effects on human health which include altered immune function and susceptibility to viral infections, biochemical stresses, cancer, and even diabetes. Many of the beneficial effects of Se can be attributed to selenoproteins; proteins containing Se in the form of the 21st amino acid selenocysteine (Sec). The diversity of substrates and biochemical pathways that selenoproteins act upon likely explains the multiple health effects associated with Se intake. Selenocysteine is incorporated into selenoproteins during translation by an unconventional mechanism involving Sec-tRNA decoding of UGA codons. This translational redefinition of UGA codons provides a unique mechanism by which selenoprotein expression may be controlled. Consequently, the regulation of selenoprotein synthesis is quite complex and likely involves control of selenocysteine incorporation efficiency and mRNA stability (due to nonsense mediated decay) in addition to regulation of transcription and translation initiation. Here we propose to systematically examine and clarify the molecular mechanisms of selenocysteine incorporation and control of selenoprotein synthesis using a combination of new deep-sequencing approaches and well established biochemical methods. Ribosome profiling (deep-sequencing of ribosome protected mRNA footprints) will be used to examine the location and density of ribosomes actively translating selenoprotein mRNAs in vivo (mouse tissues). From this information it will be possible to quantify both translation initiation and Sec incorporation efficiency in the context of controlled changes in diet or genetic backgrounds. Combined with measurements of mRNA abundance, this methodology provides an ideal tool to determine precisely how changing biological conditions affect selenoprotein synthesis. Preliminary data is presented which challenges conventional thinking about the mechanism of selenocysteine incorporation and how cis- and trans-acting factors regulate selenoprotein expression.
In Aim 1, we propose to continue our studies of the mechanisms by which altered dietary selenium intake affects selenoprotein expression.
In Aim 2, we propose to test hypothesis regarding the mechanism of Sec incorporation using genetically modified mice containing mutations in key cis- and trans-acting factors required for Sec incorporation. Finally, in Aim 3 we propose to examine the impact of altered selenoprotein expression on transcriptional and translational control of gene expression across the genome.

Public Health Relevance

Selenium deficiency or excess has profound effects on the expression of selenoproteins and can lead to a variety of human health disorders. Despite significant advances in identification of the mechanism by which selenium is incorporated into selenoproteins as the amino acid selenocysteine, there remain significant gaps in our knowledge of the molecular mechanisms controlling this process. The broad objectives of this proposal are to improve our understanding of how selenium status controls the synthesis of selenoproteins, and ultimately affects human health and disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM114291-01
Application #
8863770
Study Section
Integrative Nutrition and Metabolic Processes Study Section (INMP)
Program Officer
Anderson, Vernon
Project Start
2015-05-01
Project End
2019-02-28
Budget Start
2015-05-01
Budget End
2016-02-29
Support Year
1
Fiscal Year
2015
Total Cost
$283,100
Indirect Cost
$93,100
Name
University of Utah
Department
Genetics
Type
Schools of Medicine
DUNS #
009095365
City
Salt Lake City
State
UT
Country
United States
Zip Code
84112
Dalley, Brian K; Baird, Lisa; Howard, Michael T (2018) Studying Selenoprotein mRNA Translation Using RNA-Seq and Ribosome Profiling. Methods Mol Biol 1661:103-123
Drummond, Micah J; Reidy, Paul T; Baird, Lisa M et al. (2017) Leucine Differentially Regulates Gene-Specific Translation in Mouse Skeletal Muscle. J Nutr 147:1616-1623
Loughran, Gary; Howard, Michael T; Firth, Andrew E et al. (2017) Avoidance of reporter assay distortions from fused dual reporters. RNA 23:1285-1289
Gladyshev, Vadim N; Arnér, Elias S; Berry, Marla J et al. (2016) Selenoprotein Gene Nomenclature. J Biol Chem 291:24036-24040
Wu, Sen; Mariotti, Marco; Santesmasses, Didac et al. (2016) Human selenoprotein P and S variant mRNAs with different numbers of SECIS elements and inferences from mutant mice of the roles of multiple SECIS elements. Open Biol 6:
Fradejas-Villar, Noelia; Seeher, Sandra; Anderson, Christine B et al. (2016) The RNA-binding protein Secisbp2 differentially modulates UGA codon reassignment and RNA decay. Nucleic Acids Res :
Tsuji, Petra A; Carlson, Bradley A; Anderson, Christine B et al. (2015) Dietary Selenium Levels Affect Selenoprotein Expression and Support the Interferon-? and IL-6 Immune Response Pathways in Mice. Nutrients 7:6529-49