of the parent project: In recent years, the field of bacterial cell-size control has received broad attention due to the discovery of the ?adder? principle by Christine Jacobs-Wagner?s lab and my lab. This phenomenological principle states that cells add constant size between birth and division regardless of cell size at birth. Until now, the vast majority of bacteria, budding yeast, and even some mammalian cell lines have been shown to follow the adder principle. This directly refutes the 50-year old checkpoint-based paradigm of cell-size control that cells should divide when they reach a fixed size. The goal of the funded parent award is to understand the mechanisms underlying the adder principle. So far, our research has revealed that the adder phenotype requires two general principles in biology (Si et al. 2019): (1) accumulation of division proteins (such as FtsZ in bacteria) to their threshold number (2) their balanced biosynthesis during cell elongation. Therefore, the adder principle is naturally robust to static growth inhibition, and these mechanistic principles further allowed us to ?reprogram? cell-size homeostasis in a quantitatively predictive manner in both Gram-negative Escherichia coli and Gram-positive Bacillus subtilis.

Public Health Relevance

Cell size is intimately coupled with cell growth and the cell cycle, the fundamental process underlying both healthydevelopment(childhoodthroughadolescence)andpathologicdisease(disruptedcellularhomeostasis in old age, cancer). This proposal aims to establish a causative relationship between genome size, proteome composition, and cell size and, thus, a quantitative understanding of a process critically important to nearly everyaspectofhumanlife.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
3R01GM118565-05S1
Application #
10146096
Study Section
Program Officer
Resat, Haluk
Project Start
2016-04-01
Project End
2021-03-31
Budget Start
2020-04-01
Budget End
2021-03-31
Support Year
5
Fiscal Year
2020
Total Cost
Indirect Cost
Name
University of California, San Diego
Department
Type
University-Wide
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Jun, Suckjoon; Si, Fangwei; Pugatch, Rami et al. (2018) Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review. Rep Prog Phys 81:056601
Sekar, Karthik; Rusconi, Roberto; Sauls, John T et al. (2018) Synthesis and degradation of FtsZ quantitatively predict the first cell division in starved bacteria. Mol Syst Biol 14:e8623
Li, Xin-Tian; Sou, Cindy; Jun, Suckjoon (2017) Protocol for Construction of a Tunable CRISPR Interference (tCRISPRi) Strain for Escherichia coli. Bio Protoc 7:
Si, Fangwei; Li, Dongyang; Cox, Sarah E et al. (2017) Invariance of Initiation Mass and Predictability of Cell Size in Escherichia coli. Curr Biol 27:1278-1287
Jun, Suckjoon; Rust, Michael J (2017) A Fundamental Unit of Cell Size in Bacteria. Trends Genet 33:433-435
Taheri-Araghi, Sattar; Bradde, Serena; Sauls, John T et al. (2017) Cell-Size Control and Homeostasis in Bacteria. Curr Biol 27:1392
Sauls, John T; Li, Dongyang; Jun, Suckjoon (2016) Adder and a coarse-grained approach to cell size homeostasis in bacteria. Curr Opin Cell Biol 38:38-44
Li, Xin-Tian; Jun, Yonggun; Erickstad, Michael J et al. (2016) tCRISPRi: tunable and reversible, one-step control of gene expression. Sci Rep 6:39076