Schizophrenia is an illness with enormous public health significance, affecting approximately 1% of the population and inflicting immense personal and economic cost. Treatment possibilities for schizophrenia are still limited, at least in part because of poor understanding of its anatomical, neural, cognitive, and genetic substrates. Morphometric and functional neuroimaging technologies suggest that schizophrenia affects distributed brain circuits, but identifying significant circuits in such rich data sources is challenging. The primary goal of this proposed project is to identify key functional and anatomical networks that are altered in schizophrenia. To accomplish this, we will develop novel, data-driven Bayesian computational model search techniques that can automatically locate significant and clinically relevant network descriptions of rich, multimodal schizophrenia data. These network models will inform us about the specific neural and mental substrates of schizophrenia, will correlate them with exogenous clinical assessments and treatment outcomes, and will ultimately guide both future investigations of schizophrenia and treatment courses. Data will be obtained from the Clinical Imaging Consortium of the Mental Illness and Neuroscience Discovery (MIND) Institute, who are performing an unprecedented multi-site, multi-modality study of schizophrenia. This study will examine hundreds of schizophrenic patients and a matched number of controls by collecting a sophisticated suite of neuroimaging data (including structural MRI, fMRI, DTI, EEG and MEG data) and genetic, clinical and psychiatric variables from each subject. We will use dynamic Bayesian networks (DBNs) as our model class and DBN structure search methods as the statistical model induction method. We will couple these methods to rigorous confidence testing, controls for multiple hypothesis evaluation, and expert evaluation of the resulting models. The advantages of this approach are that it can identify a wider class of relationships than can linear techniques; the resulting models have a straightforward interpretation as activity networks; it allows the incorporation of domain knowledge as Bayesian structural priors; and it can be naturally extended to incorporate exogenous variables or alternate imaging modalities. Our work will yield novel understanding of the neural network substrates of schizophrenia and their relationships to behavioral, genetic, and clinical features and treatment outcomes. This work will contribute toward improved diagnostics and therapies for schizophrenia, a disease that affects millions of people.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Research Project (R01)
Project #
5R01MH076282-02
Application #
7124215
Study Section
Special Emphasis Panel (ZRG1-IFCN-B (50))
Program Officer
Glanzman, Dennis L
Project Start
2005-09-20
Project End
2008-08-31
Budget Start
2006-09-01
Budget End
2007-08-31
Support Year
2
Fiscal Year
2006
Total Cost
$325,814
Indirect Cost
Name
University of New Mexico
Department
Biostatistics & Other Math Sci
Type
Schools of Engineering
DUNS #
868853094
City
Albuquerque
State
NM
Country
United States
Zip Code
87131
Hunter, Michael A; Coffman, Brian A; Gasparovic, Charles et al. (2015) Baseline effects of transcranial direct current stimulation on glutamatergic neurotransmission and large-scale network connectivity. Brain Res 1594:92-107
Plis, Sergey M; Sui, Jing; Lane, Terran et al. (2014) High-order interactions observed in multi-task intrinsic networks are dominant indicators of aberrant brain function in schizophrenia. Neuroimage 102 Pt 1:35-48
Plis, Sergey M; Potluru, Vamsi K; Lane, Terran et al. (2011) Correlated Noise: How it Breaks NMF, and What to Do About It. J Signal Process Syst 65:351-359
Roy, Sushmita; Werner-Washburne, Margaret; Lane, Terran (2011) A multiple network learning approach to capture system-wide condition-specific responses. Bioinformatics 27:1832-8
Plis, Sergey M; Weisend, Michael P; Damaraju, Eswar et al. (2011) Effective connectivity analysis of fMRI and MEG data collected under identical paradigms. Comput Biol Med 41:1156-65
Roy, Sushmita; Lane, Terran; Werner-Washburne, Margaret (2009) Learning structurally consistent undirected probabilistic graphical models. Proc Int Conf Mach Learn 382:905-912
Roy, Sushmita; Martinez, Diego; Platero, Harriett et al. (2009) Exploiting amino acid composition for predicting protein-protein interactions. PLoS One 4:e7813
Burge, John; Lane, Terran; Link, Hamilton et al. (2009) Discrete dynamic Bayesian network analysis of fMRI data. Hum Brain Mapp 30:122-37
Qiu, Shibin; Lane, Terran (2009) A framework for multiple kernel support vector regression and its applications to siRNA efficacy prediction. IEEE/ACM Trans Comput Biol Bioinform 6:190-9
Roy, Sushmita; Lane, Terran; Werner-Washburne, Margaret et al. (2009) Inference of functional networks of condition-specific response--a case study of quiescence in yeast. Pac Symp Biocomput :51-62

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