RNA modification, and N6 methyladenosine (m6A) in particular, is a newly discovered epigenetic mechanism in the adult brain that is has recently been shown to be highly dynamic and, as indicated by our preliminary evidence, appears to be involved in fear-related learning and memory. The overarching goal of this research program is to establish, for the first time, a causal relationship between the epitranscriptomic regulation of gene expression and the formation and maintenance of memory in a preclinical model of fear-related anxiety disorder. We can then capitalize on this information to design better treatments for neuropsychiatric disorders characterized by impairments in cognitive function. Successful completion of these experiments also has the potential to dramatically change the way we think about mechanisms of adaptive plasticity by shedding new light on how the qualitative nature of RNA, rather than its overall abundance, is involved in a key learning process with implications for our understanding of neuropsychiatric disorders characterized by abnormally intense memories. This will be achieved through a potent combination of advance high-throughput sequencing approaches, robust behavioral paradigms and viral-mediated manipulation of gene activity in the adult brain.

Public Health Relevance

By identifying and characterizing the molecular mechanisms that influence the acquisition and extinction of fear-related memories, the findings of the experiments outlined in this application may have broad reaching translational implications by establishing RNA modifications as targets for therapeutic intervention in fear- related anxiety disorders.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Research Project (R01)
Project #
5R01MH109588-03
Application #
9416172
Study Section
Molecular Neurogenetics Study Section (MNG)
Program Officer
Arguello, Alexander
Project Start
2016-04-15
Project End
2021-01-31
Budget Start
2018-02-01
Budget End
2019-01-31
Support Year
3
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of California Irvine
Department
Other Basic Sciences
Type
Schools of Arts and Sciences
DUNS #
046705849
City
Irvine
State
CA
Country
United States
Zip Code
92617
Chan, Dalen; Beasley, Samantha; Zhen, Yuran et al. (2018) Facile synthesis and evaluation of a dual-functioning furoyl probe for in-cell SHAPE. Bioorg Med Chem Lett 28:601-605
Leighton, Laura J; Zhao, Qiongyi; Li, Xiang et al. (2018) A Functional Role for the Epigenetic Regulator ING1 in Activity-induced Gene Expression in Primary Cortical Neurons. Neuroscience 369:248-260
Zajaczkowski, Esmi L; Zhao, Qiong-Yi; Zhang, Zong Hong et al. (2018) Bioorthogonal Metabolic Labeling of Nascent RNA in Neurons Improves the Sensitivity of Transcriptome-Wide Profiling. ACS Chem Neurosci 9:1858-1865
Feng, Chao; Chan, Dalen; Joseph, Jojo et al. (2018) Light-activated chemical probing of nucleobase solvent accessibility inside cells. Nat Chem Biol 14:276-283
Leighton, L J; Ke, K; Zajaczkowski, E L et al. (2018) Experience-dependent neural plasticity, learning, and memory in the era of epitranscriptomics. Genes Brain Behav 17:e12426
Chan, Dalen; Spitale, Robert C (2017) Defining Functional Structured RNA inside Living Cells. Biochemistry 56:5847-5848
Feng, Chao; Chan, Dalen; Spitale, Robert C (2017) Assaying RNA Structure Inside Living Cells with SHAPE. Methods Mol Biol 1648:247-256
Chan, Dalen; Feng, Chao; Spitale, Robert C (2017) Measuring RNA structure transcriptome-wide with icSHAPE. Methods 120:85-90
Abdelsayed, Michael M; Ho, Bao T; Vu, Michael M K et al. (2017) Multiplex Aptamer Discovery through Apta-Seq and Its Application to ATP Aptamers Derived from Human-Genomic SELEX. ACS Chem Biol 12:2149-2156
Pang, Terence Y C; Short, Annabel K; Bredy, Timothy W et al. (2017) Transgenerational paternal transmission of acquired traits: Stress-induced modification of the sperm regulatory transcriptome and offspring phenotypes. Curr Opin Behav Sci 14:140-147

Showing the most recent 10 out of 14 publications