The overall objective of the proposed research is to determine the mechanism by which the clustered protocadherins (Pcdhs) mediate neuronal self-avoidance, a critical property of all nervous systems. The Pcdhs, encoded in three large gene clusters controlled by alternative promoter choice, are expressed stochastically in neurons, diversifying each neuronal plasma membranes with distinctive sets of Pcdh isoforms. This diversity is thought to underlie a molecular ?barcode? for individual neurons, which allows cells to distinguish between self and non-self to mediate self-avoidance. In the prior funding period we defined the functional architecture of Pcdhs, showing that they form promiscuous cis-dimer recognition units in their membrane-proximal domains, and recognize other Pcdh recognition units in trans through large interfaces encoded in domains EC1-EC4. We mapped these interfaces by x-ray crystallography and mutagenesis. The requirement that Pcdhs encode sufficient diversity to avoid inappropriate recognition of non-self neurons as self, has led us to propose two alternative models, each in molecular detail, for Pcdh function. This proposal, is aimed at distinguishing these models to arrive at the true mechanism of Pcdh function.
Defects in neural circuit assembly are thought to play a key role in a number of neurological disorders, ranging from autism, to mood disorders, to epilepsy. Based on recent observations linking mutations in the clustered protocadherins to autism and epilepsy, a better understanding of the structure and function of protocadherins may provide important insights into these diseases and lead to new modes of treatment.
| Bepler, Tristan; Morin, Andrew; Noble, Alex J et al. (2018) Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographs. Res Comput Mol Biol 10812:245-247 |
| Noble, Alex J; Dandey, Venkata P; Wei, Hui et al. (2018) Routine single particle CryoEM sample and grid characterization by tomography. Elife 7: |
| Larsen, Ida Signe Bohse; Narimatsu, Yoshiki; Joshi, Hiren Jitendra et al. (2017) Discovery of an O-mannosylation pathway selectively serving cadherins and protocadherins. Proc Natl Acad Sci U S A 114:11163-11168 |
| Rubinstein, Rotem; Goodman, Kerry Marie; Maniatis, Tom et al. (2017) Structural origins of clustered protocadherin-mediated neuronal barcoding. Semin Cell Dev Biol 69:140-150 |
| Goodman, Kerry M; Rubinstein, Rotem; Dan, Hanbin et al. (2017) Protocadherin cis-dimer architecture and recognition unit diversity. Proc Natl Acad Sci U S A 114:E9829-E9837 |
