Spinocerebellar ataxia type 6 (SCA6) is an untreatable neurodegenerative disease due to CAG repeat expansions in the gene, CACNA1A, that cause causing degeneration of cerebellar Purkinje cells and ataxia. There is no known treatment, although gene-silencing approaches targeted towards silencing the toxic protein have shown promise in other CAG repeat disorders. The CACNA1A mRNA encodes two proteins, the ?1A subunit of the neuronal P/Q-type voltage-gated Ca2+ channel, and ?1ACT, a protein discovered by my group, that also bears the polyQ tract. This is critical, since homozygous CACNA1A deletion is lethal, suggesting that complete gene silencing approach to treatment will be harmful. However, studies using both mouse genetic models and human-derived neuronal cells have convincingly excluded a role of the expanded polyQ tracts in altering P/Q channel function in SCA6. Furthermore, our recent evidence suggests that SCA6 is mediated by the second CACNA1A gene product, ?1ACT, a transcription factor (TF) critical for cerebellar cortical development, dispensable in mice in adulthood. ?1ACT with expanded polyQ tract (?1ACTSCA6) impairs its molecular function and is toxic in Purkinje cells (PCs). There are two goals to this project: 1. To determine whether expanded ?1ACT causes SCA6 by a disruption of its TF function or by a direct toxic effect. 2. Prove that selective silencing of ?1ACT, the second CACNA1A gene product, is an effective treatment for SCA6. ?1ACT is expressed by a novel mechanism via an internal ribosomal entry site (IRES) within CACNA1A, molecular treatments, targeted to the IRES to block ?1ACT translation and can prevent disease in an acute SCA6 model. The long range goal of this project is develop a treatment for SCA6. To address this, as defined in the Aims below, we will identify the key protein domains and post-translational modifications that determine the physiological and pathological properties of ?1ACT and determine the effects of ?1ACTWT and ?1ACTSCA6 on chromatin accessibility and dsDNA breaks. We will demonstrate that IRES-directed therapies are an effective treatment for SCA6.
Aim 1. Define the key protein domains and post-translational modifications that determine the transcription factor properties of ?1ACT and its toxicity in SCA6.
Aim 2. Determine the effects of ?1ACTWT and ?1ACTSCA6 on chromatin accessibility and dsDNA Aim 3. Prove that IRES-directed therapies correct the molecular, cellular and clinicopathological features of SCA6.

Public Health Relevance

Gene silencing therapies have shown great promise in the treatment of neurodegenerative disease. To be effective the function of the gene product being silenced and the long term consequences of this silencing need to be fully understood. In this study will analyze the structure function, and mechanism action of the newly identified protein, ?1ACT. Subsequently we will inhibit its expression using a novel gene silencing approach and demonstrate that the toxic features of SCA6 are abolished.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
2R01NS082788-06
Application #
9839137
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Miller, Daniel L
Project Start
2014-02-15
Project End
2020-04-30
Budget Start
2019-05-15
Budget End
2020-04-30
Support Year
6
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of Chicago
Department
Neurology
Type
Schools of Medicine
DUNS #
005421136
City
Chicago
State
IL
Country
United States
Zip Code
60637
Pastor, Parviz Daniel Hejazi; Du, Xiaofei; Fazal, Sarah et al. (2018) Targeting the CACNA1A IRES as a Treatment for Spinocerebellar Ataxia Type 6. Cerebellum 17:72-77
Karginov, Timofey A; Pastor, Daniel Parviz Hejazi; Semler, Bert L et al. (2017) Mammalian Polycistronic mRNAs and Disease. Trends Genet 33:129-142
Miyazaki, Yu; Du, Xiaofei; Muramatsu, Shin-Ichi et al. (2016) An miRNA-mediated therapy for SCA6 blocks IRES-driven translation of the CACNA1A second cistron. Sci Transl Med 8:347ra94
Tsou, Wei-Ling; Hosking, Ryan R; Burr, Aaron A et al. (2015) DnaJ-1 and karyopherin ?3 suppress degeneration in a new Drosophila model of Spinocerebellar Ataxia Type 6. Hum Mol Genet 24:4385-96
Du, Xiaofei; Semler, Bert L; Gomez, Christopher M (2014) Revelations from a bicistronic calcium channel gene. Cell Cycle 13:875-6