Protein tyrosine phosphatases (PTPs) catalyze the dephosphorylation of phosphotyrosine, a central signal transduction control element. Small-molecule inhibitors that are specific for each cellular PTP would be valuable tools in dissecting phosphorylation networks. However, the common architecture of the conserved PTP protein fold impedes the discovery of selective PTP inhibitors. The broad objectives of the proposed research are to generate allele-specific inhibitors of PTPs, to validate their potency and selectivity in living cells, and to use the PTP inhibitors in mammalian cell-signaling experiments. Two distinct strategies- active-site engineering and WPD-loop targeting will be employed to generate PTPs that are uniquely sensitive to applied small-molecule inhibitors. In both approaches, functionally silent mutation(s) on a target PTP will sensitize the enzyme to a small molecule that does not inhibit wild-type PTPs. A significant advantage of these engineered-sensitivity approaches to PTP inhibition is that they can potentially yield general strategies for targeting multiple members of a large protein family- the amino-acid residues identified for sensitization are present across the protein family, eliminating the need to redesign a protein/inhibitor interface for each new PTP target. Once highly sensitizing mutations are discovered on model PTPs, primary-sequence alignments will allow for the identification of the corresponding positions in other PTPs, enabling the design, expression, and analysis of an array of sensitized PTPs for target-specific inhibition. Transfection of cells with genes encoding a sensitized PTP generates a biological system in which only one PTP can be blocked by the designed inhibitor, allowing for precise chemical control of a target PTP's activity in signaling studies. Improperly regulated PTP activity has been implicated as a causative agent in a range of human diseases, including leukemia, solid-tumor cancers, type I and type II diabetes, and a host of autoimmune disorders. A series of highly selective phosphatase inhibitors can be used to delineate the precise functions of each target PTP in signaling cascades and to validate PTPs as therapeutic targets.

Public Health Relevance

Protein tyrosine phosphatases (PTPs) are enzymes that help to send cellular messages by enzymatically removing phosphate groups from other proteins. When cellular phosphate removal goes awry, so do the basic regulatory mechanisms of the cell, and improperly regulated PTP activity has been implicated as a causative agent in a range of human diseases, including cancer, diabetes, and autoimmune disorders. We are designing small-molecule inhibitors that can be used to study the functions of individual PTPs in cellular experiments;this work will thus provide valuable tools for dissecting cellular phosphorylation networks and for validating PTPs as potential therapeutic targets.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Academic Research Enhancement Awards (AREA) (R15)
Project #
2R15GM071388-02
Application #
7714452
Study Section
Macromolecular Structure and Function E Study Section (MSFE)
Program Officer
Ikeda, Richard A
Project Start
2005-08-15
Project End
2012-07-31
Budget Start
2009-08-01
Budget End
2012-07-31
Support Year
2
Fiscal Year
2009
Total Cost
$201,539
Indirect Cost
Name
Amherst College
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
066985367
City
Amherst
State
MA
Country
United States
Zip Code
01002
Korntner, Samuel; Pomorski, Adam; Kr??el, Artur et al. (2018) Optimized allosteric inhibition of engineered protein tyrosine phosphatases with an expanded palette of biarsenical small molecules. Bioorg Med Chem 26:2610-2620
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Chan, Wai Cheung; Knowlton, Gregory S; Bishop, Anthony C (2017) Activation of Engineered Protein Tyrosine Phosphatases with the Biarsenical Compound AsCy3-EDT2. Chembiochem 18:1950-1958
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Bishop, Anthony C (2016) A missense methionine mutation augments catalytic activity but reduces thermal stability in two protein tyrosine phosphatases. Biochem Biophys Res Commun 481:153-158
Chio, Cynthia M; Cheng, Karen W; Bishop, Anthony C (2015) Direct Chemical Activation of a Rationally Engineered Signaling Enzyme. Chembiochem 16:1735-9
Chio, Cynthia M; Yu, Xiaoling; Bishop, Anthony C (2015) Rational design of allosteric-inhibition sites in classical protein tyrosine phosphatases. Bioorg Med Chem 23:2828-38
Pomorski, Adam; Adamczyk, Justyna; Bishop, Anthony C et al. (2015) Probing the target-specific inhibition of sensitized protein tyrosine phosphatases with biarsenical probes. Org Biomol Chem 13:1395-403
Chio, Cynthia M; Lim, Christopher S; Bishop, Anthony C (2015) Targeting a cryptic allosteric site for selective inhibition of the oncogenic protein tyrosine phosphatase Shp2. Biochemistry 54:497-504
Harris, Leigh K; Frumm, Stacey M; Bishop, Anthony C (2013) A general assay for monitoring the activities of protein tyrosine phosphatases in living eukaryotic cells. Anal Biochem 435:99-105

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