Rapid recognition of invading pathogens by the host organism is crucial in mounting an effective immune response. Conserved structural features on pathogens termed PAMPs are recognized by the Toll-like cell surface receptors, which are part of the evolutionary conserved innate immune system. We had previously identified the activation of Interferon Regulatory Factor 3 (IRF3) and the subsequent the induction of Interferon Stimulated Genes (ISGs) as a novel signaling pathway that is initiated by TLR ligands. We have characterized this pathway as a major contributor to septic shock syndrome, but also found that the IRF-3 activation cascade is a target for bacterial toxins such a Bacillus anthracis Lethal Factor. Recently, we studied a novel family of LPS and interferon-induced nucleic acid binding proteins (schlafen = slfn) whose members appear to alter IRF3, but not NF:B mediated transcriptional responses towards TLR ligands. The proposed research is aimed towards investigating the function of the Slfn proteins in IRF3-mediated innate immune responses. We hypothesize that the longer members of the Slfn family act either as cytoplasmic sensors of foreign nucleic acids directly, or possibly as cofactors to such sensory proteins, whereas the medium and short cellular Slfn isoforms as well as the viral Slfn proteins function to attenuate the innate immune response. Experiments are proposed to characterize the specificity of Slfn function, to define their point-of-action in the IRF3 activation cascade, and to identify Slfn-interacting proteins. Results from these proposed studies will not only facilitate our understanding of the mechanism of IRF3 activation, but will also shed light on the role of Slfn proteins as novel modulators of the innate immune response under physiological and pathological processes.

Public Health Relevance

IRF3 is one of the key mediators of TLR-induced responses. Lack of IRF3-activation leads to an immobilization of the immune response, yet attenuation of this pathway can be beneficial during septic processes. Thus, a detailed understanding of factors such as Slfn proteins that can modulate IRF3 activation is likely to provide novel targets for pharmacological intervention during infectious disease processes.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Exploratory/Developmental Grants (R21)
Project #
5R21AI088490-02
Application #
8069241
Study Section
Immunity and Host Defense Study Section (IHD)
Program Officer
Palker, Thomas J
Project Start
2010-05-05
Project End
2013-04-30
Budget Start
2011-05-01
Budget End
2013-04-30
Support Year
2
Fiscal Year
2011
Total Cost
$191,194
Indirect Cost
Name
University of California San Diego
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Li, Manqing; Kao, Elaine; Gao, Xia et al. (2012) Codon-usage-based inhibition of HIV protein synthesis by human schlafen 11. Nature 491:125-8