Chronic pancreatitis is a painful disorder characterized by fibrosis and destruction of the normal pancreatic architecture. Alcohol abuse is the most common etiologic factor of chronic pancreatitis, resulting in over 70- 80% of cases. An improved understanding of the pathogenesis of alcohol induced pancreatic injury are needed to: 1) assess the benefits of therapy directed at modifying or retarding disease progression, 2) identify patients at risk for long term complications such as malabsorption and diabetes and to 3) assist in the safe and accurate evaluation of abdominal pain syndromes often misinterpreted as chronic pancreatitis. The objective of this proposal is to study the effects of alcohol on the proteomic secretory profile of pancreatic fluid in various stages of chronic alcohol induced pancreatitis. The analysis of the global proteome of any complex body fluid is challenging, but emerging proteomic technologies are playing an essential role in mechanistic studies and in the search for useful biomarkers of disease. Pancreatic fluid is an excellent specimen for the identification of novel proteins since it has a low complexity compared to serum and may be a rich source of low-abundant proteins which are potentially up- or down regulated in chronic pancreatitis. We plan to test the following overall HYPOTHESIS: Alcohol induces changes in the pancreas fluid protein profile that reflect the progressive scarring, inflammation and fibrosis that leads to end organ damage such as malabsorption, diabetes and cancer. To test our hypothesis and achieve our objective we have developed a virtually risk-free endoscopic collection procedure, established a robust preparation method and a refined sample handling technique to generate reproducible protein profiles in pancreatic fluid.
SPECIFIC AIMS : (1) To Develop Cohorts and Collect Pancreatic Fluid for Proteomic Profiling of Alcohol- induced Chronic Pancreatitis. (2) To Determine the Protein Profile of Pancreatic Fluid in Healthy Controls, Alcohol-induced Acute Pancreatitis, and Patients with Alcohol-induced Chronic Pancreatitis. The complete proteome of collected pancreatic fluid from each cohort will be determined using state-of-the-art proteomic technology. The qualitative and quantitative differences, molecular function and cellular origin of identified proteins will be compared to investigate the effect of alcohol on the proteomic secretory profile of pancreatic fluid. SIGNIFICANCE: Identifying the unique protein patterns associated with chronic pancreatitis disease severity / dysfunction within the pancreatic fluid may illuminate the mechanisms of alcohol induced pancreas injury.

Public Health Relevance

We hypothesize that alcohol induces changes in the pancreas fluid protein profile that reflect the progressive scarring, inflammation and fibrosis that leads to end organ damage. To test our hypothesis and achieve our objective we have developed a virtually risk-free endoscopic collection procedure, established a robust preparation method and a refined sample handling technique to generate reproducible protein profiles in pancreatic fluid. Identifying the unique protein patterns associated with chronic alcohol induced pancreatic disease severity within the pancreatic fluid may illuminate the mechanisms of alcohol induced pancreas injury.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Exploratory/Developmental Grants (R21)
Project #
5R21DK081703-02
Application #
8115939
Study Section
Clinical, Integrative and Molecular Gastroenterology Study Section (CIMG)
Program Officer
Serrano, Jose
Project Start
2010-07-25
Project End
2013-05-31
Budget Start
2011-06-01
Budget End
2013-05-31
Support Year
2
Fiscal Year
2011
Total Cost
$217,425
Indirect Cost
Name
Brigham and Women's Hospital
Department
Type
DUNS #
030811269
City
Boston
State
MA
Country
United States
Zip Code
02115
Conwell, Darwin L; Lee, Linda S; Yadav, Dhiraj et al. (2014) American Pancreatic Association Practice Guidelines in Chronic Pancreatitis: evidence-based report on diagnostic guidelines. Pancreas 43:1143-62
Paulo, Joao A; Gaun, Aleksandr; Kadiyala, Vivek et al. (2013) Subcellular fractionation enhances proteome coverage of pancreatic duct cells. Biochim Biophys Acta 1834:791-7
Paulo, Joao A; Kadiyala, Vivek; Brizard, Scott et al. (2013) Short Gel, Long Gradient Liquid Chromatography Tandem Mass Spectrometry to Discover Urinary Biomarkers of Chronic Pancreatitis. Open Proteomics J 6:1-13
Paulo, Joao A; Urrutia, Raul; Kadiyala, Vivek et al. (2013) Cross-species analysis of nicotine-induced proteomic alterations in pancreatic cells. Proteomics 13:1499-1512
Paulo, Joao A; Kadiyala, Vivek; Brizard, Scott et al. (2013) A proteomic comparison of formalin-fixed paraffin-embedded pancreatic tissue from autoimmune pancreatitis, chronic pancreatitis, and pancreatic cancer. JOP 14:405-14
Paulo, Joao A; Kadiyala, Vivek; Brizard, Scott et al. (2013) Post-translational modifications of pancreatic fluid proteins collected via the endoscopic pancreatic function test (ePFT). J Proteomics 92:216-27
Paulo, Joao A; Kadiyala, Vivek; Banks, Peter A et al. (2013) Mass spectrometry-based quantitative proteomic profiling of human pancreatic and hepatic stellate cell lines. Genomics Proteomics Bioinformatics 11:105-13
Paulo, Joao A; Kadiyala, Vivek; Gaun, Aleksandr et al. (2013) Analysis of endoscopic pancreatic function test (ePFT)-collected pancreatic fluid proteins precipitated via ultracentrifugation. JOP 14:176-86
Ghafari, Maryam; Hoger, Harald; Keihan Falsafi, Soheil et al. (2012) Mass spectrometrical identification of hippocampal NMDA receptor subunits NR1, NR2A-D and five novel phosphorylation sites on NR2A and NR2B. J Proteome Res 11:1891-6
Paulo, Joao A; Lee, Linda S; Banks, Peter A et al. (2012) Proteomic analysis of formalin-fixed paraffin-embedded pancreatic tissue using liquid chromatography tandem mass spectrometry. Pancreas 41:175-85

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