An Ultra High-Density Virtual Array with Nonlinear Processing of Multimodal Neural Recordings A major goal of neuroscience is to record the activity of all neurons in an area of an intact brain and understand the relationship between neural activity and behavior. However, with current technologies, it is not feasible to have a direct and simultaneous access to every neuron in a three-dimensional brain area. Here we propose a novel approach, combining an innovative signal processing method with optical and electrical recording technologies to `virtually' record from all neurons in a three dimensional volume. If successful, this approach will allow us to substantially increase the number of recorded neurons without the need for direct optical or electrical access to each neuron. The proposed Virtual Array technology has the potential to dramatically increase the number of simultaneously recorded neurons in an intact brain relatively non- invasively. The common approaches include high-density electrophysiological probes, which are highly invasive and also limited in the density of recording, and fast-scanning optical techniques that have limited temporal resolution. As an alternative approach, we propose to develop a framework to computationally increase the number of recorded neurons out of recording data from simultaneous electrophysiology and imaging. The computational framework will be developed from a dataset in which micro- electrocorticogram (ECoG) are recorded simultaneously while the activities of the underlying neurons is recorded with two-photon calcium imaging at multiple cortical depths. We will virtually reconstruct this single-cell activity by solving appropriate optimization problem involving forward models for ECoG recordings and calcium signals.This optimization problem will be solved using alternating convex algorithms.

Public Health Relevance

Neural circuit dysfunctions are the cause of most neurological diseases, including epilepsy, Parkinson's disease, dystonia, depression and schizophrenia. Virtual arrays could lead to mapping the network dysfunctions that cause these disorders and could facilitate development of effective targeted treatments. That could greatly impact outcome for many of the one billion people affected by neurological disorders, worldwide.

Agency
National Institute of Health (NIH)
Institute
National Eye Institute (NEI)
Type
Exploratory/Developmental Grants (R21)
Project #
5R21EY029466-02
Application #
9766300
Study Section
Special Emphasis Panel (ZEY1)
Program Officer
Flanders, Martha C
Project Start
2018-09-01
Project End
2020-08-31
Budget Start
2019-09-01
Budget End
2020-08-31
Support Year
2
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of California, San Diego
Department
Type
Schools of Arts and Sciences
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093