We have tentatively identified a new group of complex-type N-linked oligosaccharides that contain covalently bound amino acids on their antennae. A carboxylate-specific monoclonal antibody shows that these species are enriched in endothelial cells, embryonic neurons, cancer cells, and on the Receptor for Advanced Glycation End products (RAGE). The carboxylated glycans directly bind to three proteins: amphoterin, annexin-I and S100A8/A9, which have been linked in various ways to inflammation, septic shock, and tumor growth/metastasis. Significantly, we also found that the novel sugar chains mediate endothelium/leukocyte binding, intraperitoneal inflammation, neurite outgrowth, and binding of purified RAGE to amphoterin. Unfortunately, we do not know the precise structure(s) of the carboxylated oligosaccharides. Therefore, our aim is: To establish the structure of these novel and physiologically important glycans. Establishing these structures is critical for understanding the molecular basis of their involvement in the pathophysiology described above and for designing therapeutic strategies. The impact of solving these structures could be quite substantial. However, in the past, we have had difficulty establishing this structure, and therein lies the risk in this project and why it responds to PA-97-049.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Exploratory/Developmental Grants (R21)
Project #
1R21GM065323-01
Application #
6464913
Study Section
Physiological Chemistry Study Section (PC)
Program Officer
Marino, Pamela
Project Start
2002-04-01
Project End
2004-03-31
Budget Start
2002-04-01
Budget End
2003-03-31
Support Year
1
Fiscal Year
2002
Total Cost
$148,500
Indirect Cost
Name
Sanford-Burnham Medical Research Institute
Department
Type
DUNS #
009214214
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Srikrishna, Geetha; Brive, Lena; Freeze, Hudson H (2005) Novel carboxylated N-glycans contain oligosaccharide-linked glutamic acid. Biochem Biophys Res Commun 332:1020-7