Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
First Independent Research Support & Transition (FIRST) Awards (R29)
Project #
1R29GM054630-01
Application #
2193976
Study Section
Special Emphasis Panel (ZRG3-BBCA (01))
Project Start
1996-09-30
Project End
2001-08-31
Budget Start
1996-09-30
Budget End
1997-08-31
Support Year
1
Fiscal Year
1996
Total Cost
Indirect Cost
Name
Institute for Cancer Research
Department
Type
DUNS #
872612445
City
Philadelphia
State
PA
Country
United States
Zip Code
19111
Feng, Jin-an (2007) Improving pairwise sequence alignment between distantly related proteins. Methods Mol Biol 395:255-68
Li, Wei; Wen, Liting; Feng, Jin-An (2006) RepairNET: a bioinformatics toolbox for functional exploration of DNA damage response. J Cell Physiol 207:293-9
Wen, Liting; Li, Wei; Sobel, Marc et al. (2006) Computational exploration of the activated pathways associated with DNA damage response in breast cancer. Proteins 65:103-10
Wang, Junwen; Feng, Jin-An (2005) NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities. Proteins 58:628-37
Wen, Liting; Feng, Jin-An (2004) Repair-FunMap: a functional database of proteins of the DNA repair systems. Bioinformatics 20:2135-7
Wang, Junwen; Feng, Jin-An (2003) Exploring the sequence patterns in the alpha-helices of proteins. Protein Eng 16:799-807
Crasto, C J; Feng, J (2001) Sequence codes for extended conformation: a neighbor-dependent sequence analysis of loops in proteins. Proteins 42:399-413
Crasto, C J; Feng, J A (2000) LINKER: a program to generate linker sequences for fusion proteins. Protein Eng 13:309-12
Tang, L; Li, J; Katz, D S et al. (2000) Determining the DNA bending angle induced by non-specific high mobility group-1 (HMG-1) proteins: a novel method. Biochemistry 39:3052-60
Feng, J A; Crasto, C J; Matsumoto, Y (1998) Deoxyribose phosphate excision by the N-terminal domain of the polymerase beta: the mechanism revisited. Biochemistry 37:9605-11