Feng, Jin-an (2007) Improving pairwise sequence alignment between distantly related proteins. Methods Mol Biol 395:255-68
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Li, Wei; Wen, Liting; Feng, Jin-An (2006) RepairNET: a bioinformatics toolbox for functional exploration of DNA damage response. J Cell Physiol 207:293-9
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Wen, Liting; Li, Wei; Sobel, Marc et al. (2006) Computational exploration of the activated pathways associated with DNA damage response in breast cancer. Proteins 65:103-10
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Wang, Junwen; Feng, Jin-An (2005) NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities. Proteins 58:628-37
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Wen, Liting; Feng, Jin-An (2004) Repair-FunMap: a functional database of proteins of the DNA repair systems. Bioinformatics 20:2135-7
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Wang, Junwen; Feng, Jin-An (2003) Exploring the sequence patterns in the alpha-helices of proteins. Protein Eng 16:799-807
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Crasto, C J; Feng, J (2001) Sequence codes for extended conformation: a neighbor-dependent sequence analysis of loops in proteins. Proteins 42:399-413
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Crasto, C J; Feng, J A (2000) LINKER: a program to generate linker sequences for fusion proteins. Protein Eng 13:309-12
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Tang, L; Li, J; Katz, D S et al. (2000) Determining the DNA bending angle induced by non-specific high mobility group-1 (HMG-1) proteins: a novel method. Biochemistry 39:3052-60
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Feng, J A; Crasto, C J; Matsumoto, Y (1998) Deoxyribose phosphate excision by the N-terminal domain of the polymerase beta: the mechanism revisited. Biochemistry 37:9605-11
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