Lysosomes are the terminal organelle for major cellular catabolic pathways including autophagy and endomembrane trafficking, yet remarkably little is understood about how they rid themselves of the cellular debris they generate. Defects in this efflux contribute to nearly fifty genetic diseases collectively known as lysosomal storage diseases (LSDs), and no universal therapies are available for their treatment. Beyond their roles in catabolic metabolism, lysosomes also supply basic metabolites like fatty acids (FAs) to other organelles of the cell, but the mechanisms that govern this inter-organelle trafficking also remain obscure. I recently characterized a family of proteins that potentially enable this inter-organelle lipid flux. All homologs feature a poorly characterized PX-Associated (PXA), which preliminary data from my lab indicates directly binds to FAs. I hypothesize that PXA domains contribute to non-vesicular inter-organelle lipid exchange. Interestingly, I discovered that the yeast PXA domain-containing protein Mdm1 functions as inter-organelle ?tether? closely connecting the lysosome/vacuole to the Endoplasmic Reticulum, the major lipid synthesis organelle. Mdm1's fly homolog?called Snazurus (Snz)?is also implicated in lipid metabolism and aging, and snz-deficient flies exhibit obesity and hyper-extended lifespan. The human homolog Snx14 was recently implicated in pediatric neurological disease, likely caused by a newly recognized LSD. Collectively, I propose that PXA domain-containing proteins are important mediators of inter-organelle lipid flux and metabolism, and may function to promote the movement of metabolites like FAs between cellular organelles. These proteins thus constitute previously unrecognized but important ?hubs? of lipid metabolism and lysosome homeostasis. The research program outlined here will define the functions of PXA domain-containing proteins in lysosome function and lipid metabolism through three broad approaches: high-throughput genetic screening, the reconstitution of inter-organelle tethering, and developing in organismo lipidomics technologies. By implementing these approaches in my new lab, we will establish ourselves on the leading edge of a paradigm-shifting era that will define new pathways and mechanisms of non-vesicular lipid trafficking. These discoveries promise new therapies for LSDs, as well as new therapeutic strategies for chronic metabolic syndromes like diabetes and heart disease.

Public Health Relevance

PI: W. Mike Henne, Ph.D. Project Narrative I recently characterized a new family of proteins that play important roles in lipid metabolism. The yeast homolog Mdm1 acts as an inter-organelle ?bridge? connecting lysosomes, lipid degrading organelles, to the Endoplasmic Reticulum, which synthesizes new lipids. I hypothesize that these proteins function in inter-organelle lipid trafficking, and defects in them lead to diseases ranging from obesity in fruit flies to pediatric neurological disease in humans. My lab will characterize their roles in lysosome function and lipid metabolism, and so achieve a better understanding in how lysosomes contribute to cellular lipid metabolism and disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Unknown (R35)
Project #
5R35GM119768-04
Application #
9750013
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Maas, Stefan
Project Start
2016-08-01
Project End
2021-07-31
Budget Start
2019-08-01
Budget End
2020-07-31
Support Year
4
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of Texas Sw Medical Center Dallas
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
800771545
City
Dallas
State
TX
Country
United States
Zip Code
75390
Bryant, Dale; Liu, Yang; Datta, Sanchari et al. (2018) SNX14 mutations affect endoplasmic reticulum-associated neutral lipid metabolism in autosomal recessive spinocerebellar ataxia 20. Hum Mol Genet 27:1927-1940
Henne, W Mike; Reese, Michael L; Goodman, Joel M (2018) The assembly of lipid droplets and their roles in challenged cells. EMBO J 37:
Hariri, Hanaa; Rogers, Sean; Ugrankar, Rupali et al. (2018) Lipid droplet biogenesis is spatially coordinated at ER-vacuole contacts under nutritional stress. EMBO Rep 19:57-72
Ferguson, Shawn M; Henne, W Mike (2018) Organelles in metabolism and stress responses. Mol Biol Cell 29:691
Henne, W Mike; Hariri, Hanaa (2018) Endoplasmic Reticulum-Vacuole Contact Sites ""Bloom"" With Stress-Induced Lipid Droplets. Contact (Thousand Oaks) 1:
Henne, William Mike (2017) Discovery and Roles of ER-Endolysosomal Contact Sites in Disease. Adv Exp Med Biol 997:135-147
Henne, W Mike (2016) Organelle remodeling at membrane contact sites. J Struct Biol 196:15-9
Hariri, Hanaa; Ugrankar, Rupali; Liu, Yang et al. (2016) Inter-organelle ER-endolysosomal contact sites in metabolism and disease across evolution. Commun Integr Biol 9:e1156278
Henne, W Mike; Liou, Jen; Emr, Scott D (2015) Molecular mechanisms of inter-organelle ER-PM contact sites. Curr Opin Cell Biol 35:123-30