EXCEEDTHE SPACE PROVIDED. P-lactam antibiotics such as the penicillins and cephalosporins are among the most often prescribed antimicrobial agents. These antibiotics act by inhibiting transpeptidase enzymes (also called penicillin binding proteins or PBP's) that are essential for the synthesis of the peptidoglycan layer of the bacterial cell wall. Inhibition of peptidoglycan synthesis results in death of growing bacteria and accounts for the antimicrobial effect of P-lactam antibiotics. In response, bacteria have evolved defense mechanisms to resist the lethal effects of these drugs. Due to widespread p-lactam antimicrobial use, bacterial resistance has increased and now represents a serious threat to human health. The most common mechanism of resistance to P-lactam antibiotics is the production of p-lactamases, which cleave the antibiotic, rendering it ineffective, p-lactamases are grouped into four classes (A,B>C, and D) based on primary amino acid sequence homology. The class B enzymes require zinc for activity and catalyze the hydrolysis of virtually all P-lactam antibiotics. The goal of this study is to understand how the amino acid sequence determines the structure and activity of the class B metallo-p-lactamases IMP-1 and Bla2. In the previous funding period we used in vitro mutagenesis to randomize codons encoding amino acid residues in the active site region of the IMP-1 enzyme. These random libraries were used to identify residues that alter the substrate specificity of the enzyme. A detailed study of the residue positions that control substrate specificity will be undertaken to understand the molecular basis of recognition and catalysis of p-lactam antibiotics. This study will also include characterization of inhibitors of the IMP-1 and Bla2 p-lactamases with respect to inhibition constants and mode of inhibition. A further objective is to continue our study of the determinants of binding specificity of the p-lactamase inhibitory protein, BLIP, and to use this information to engineer BLIP molecules that bind and inhibit P-lactamases and penicillin binding proteins (PBPs) from Gram-positive bacteria. The information gained from these studies will be useful for rational antibiotic and inhibitor design that takes into account the evolutionary capacity of the target enzyme.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Method to Extend Research in Time (MERIT) Award (R37)
Project #
4R37AI032956-15
Application #
6963342
Study Section
Special Emphasis Panel (NSS)
Program Officer
Peters, Kent
Project Start
1992-07-01
Project End
2011-03-31
Budget Start
2006-05-01
Budget End
2007-04-30
Support Year
15
Fiscal Year
2006
Total Cost
$375,000
Indirect Cost
Name
Baylor College of Medicine
Department
Microbiology/Immun/Virology
Type
Schools of Medicine
DUNS #
051113330
City
Houston
State
TX
Country
United States
Zip Code
77030
Sun, Zhizeng; Hu, Liya; Sankaran, Banumathi et al. (2018) Differential active site requirements for NDM-1 ?-lactamase hydrolysis of carbapenem versus penicillin and cephalosporin antibiotics. Nat Commun 9:4524
Adamski, Carolyn J; Palzkill, Timothy (2017) BLIP-II Employs Differential Hotspot Residues To Bind Structurally Similar Staphylococcus aureus PBP2a and Class A ?-Lactamases. Biochemistry 56:1075-1084
Stojanoski, Vlatko; Adamski, Carolyn J; Hu, Liya et al. (2016) Removal of the Side Chain at the Active-Site Serine by a Glycine Substitution Increases the Stability of a Wide Range of Serine ?-Lactamases by Relieving Steric Strain. Biochemistry 55:2479-90
Chow, Dar-Chone; Rice, Kacie; Huang, Wanzhi et al. (2016) Engineering Specificity from Broad to Narrow: Design of a ?-Lactamase Inhibitory Protein (BLIP) Variant That Exclusively Binds and Detects KPC ?-Lactamase. ACS Infect Dis 2:969-979
Adamski, Carolyn J; Cardenas, Ana Maria; Brown, Nicholas G et al. (2015) Molecular basis for the catalytic specificity of the CTX-M extended-spectrum ?-lactamases. Biochemistry 54:447-57
Mehta, Shrenik C; Rice, Kacie; Palzkill, Timothy (2015) Natural Variants of the KPC-2 Carbapenemase have Evolved Increased Catalytic Efficiency for Ceftazidime Hydrolysis at the Cost of Enzyme Stability. PLoS Pathog 11:e1004949
Stojanoski, Vlatko; Chow, Dar-Chone; Fryszczyn, Bartlomiej et al. (2015) Structural Basis for Different Substrate Profiles of Two Closely Related Class D ?-Lactamases and Their Inhibition by Halogens. Biochemistry 54:3370-80
Stojanoski, Vlatko; Chow, Dar-Chone; Hu, Liya et al. (2015) A triple mutant in the ?-loop of TEM-1 ?-lactamase changes the substrate profile via a large conformational change and an altered general base for catalysis. J Biol Chem 290:10382-94
Abriata, Luciano A; Palzkill, Timothy; Dal Peraro, Matteo (2015) How structural and physicochemical determinants shape sequence constraints in a functional enzyme. PLoS One 10:e0118684
Long, S Wesley; Olsen, Randall J; Mehta, Shrenik C et al. (2014) PBP2a mutations causing high-level Ceftaroline resistance in clinical methicillin-resistant Staphylococcus aureus isolates. Antimicrob Agents Chemother 58:6668-74

Showing the most recent 10 out of 62 publications