The X-Aptamer Selection Kit (XASK) makes aptamers much more accessible to the life science market. The low-priced kit greatly minimizes the expertise and equipment required to perform aptamer selections; thus, enabling virtually any scientist with basic laboratory skills to rapidly develop his or her own synthetic next generation X-Aptamer (XA) affinity reagents. The Phase I SBIR successfully answered several fundamental questions associated with the bead-based selection technology underlying the XASK. It also conclusively demonstrated the feasibility of the kit as a commercial product. Several independent users successfully selected X-Aptamers using XASK prototypes, which far exceeded the anticipated outcome from Phase I. X-Aptamers are chemically-modified DNA affinity agents that utilize amino acid functional groups and even small molecules to enhance interaction with targets. XAs routinely exhibit nanomolar to picomolar binding affinity as well as excellent specificity, making them a promising synthetic alternative to antibodies. AM Biotech has developed a rapid, single-cycle XA discovery process that is not based on SELEX. The process is performed in two easy steps using bead-based oligonucleotide libraries and standard laboratory equipment that enable packaging the discovery processes into XASK. The Phase II SBIR will focus on; 1) enhancing the quality of the critically important bead-based libraries, and 2) optimizing the bead-based selection process to improve the success rate to >85%. The XASK is a revolutionary product that will disrupt the aptamer market and will begin to make inroads into the antibody market. AM Biotech believes that the XASK and X-Aptamers are poised for strong market penetration that will help to pull aptamers into many commercial applications.

Public Health Relevance

The X-Aptamer Selection Kit (XASK) is a revolutionary product that minimizes the expertise and equipment required to perform aptamer selections, which will make aptamers much more accessible to the life science market. Synthetic affinity molecules like aptamers have many desirable characteristics that could solve numerous problems that are associated with the antibodies that they are intended to replace. This is expected to lead to better diagnostic tests and to novel drug candidates for a wide range of diseases and conditions.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Small Business Innovation Research Grants (SBIR) - Phase II (R44)
Project #
5R44GM108110-04
Application #
9132293
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Edmonds, Charles G
Project Start
2013-09-01
Project End
2017-08-31
Budget Start
2016-09-01
Budget End
2017-08-31
Support Year
4
Fiscal Year
2016
Total Cost
Indirect Cost
Name
Am Biotechnologies, LLC
Department
Type
DUNS #
788679244
City
Houston
State
TX
Country
United States
Zip Code
77034
Dolot, Rafal; Lam, Curtis H; Sierant, Malgorzata et al. (2018) Crystal structures of thrombin in complex with chemically modified thrombin DNA aptamers reveal the origins of enhanced affinity. Nucleic Acids Res 46:4819-4830
Wang, Hongyu; Lam, Curtis H; Li, Xin et al. (2018) Selection of PD1/PD-L1 X-Aptamers. Biochimie 145:125-130
Yang, Xianbin; Dinuka Abeydeera, N; Liu, Feng-Wu et al. (2017) Origins of the enhanced affinity of RNA-protein interactions triggered by RNA phosphorodithioate backbone modification. Chem Commun (Camb) 53:10508-10511