The function of the nervous system is dependent on complex interactions between networks of neurons composed of multiple neuron types. Understanding how these networks function both in health and disease is dependent on understanding the precise connectivity between specific neurons types. It is therefore apparent that, in order to have an adequate understanding of the nervous system, it is necessary to have detailed descriptions of neuronal connectivity with the same level of precision at which these systems operate. The research proposed here is aimed at the development, refinement, and validation of a novel set of tools that will allow researchers to readily and systematically uncover neural circuits with cell type-specific resolution. These tools build on previous work in one of the PIs lab, developing and validating the potential for use of genetically modified rabies viruses, in combination with other genetic and viral technologies, to probe neural circuits. The new tools to be developed and tested include mouse lines and helper viruses which can be used to achieve cell type specific expression of genes that interface with the rabies tracing system. This will allow the modified rabies viruses to selectively infect specific cell types and to label the direct inputs to those cells. These new tools will be tested and protocols developed for their use in a broad range of nervous system structures, whose function is relevant to understanding disease states. New variants of rabies virus will also be generated in order to interface with the newly developed mouse lines. These variants will express genes to drive conditional expression of genes encoded in the genomes of the transgenic mice, such that inputs to specific cell types targeted for infection by the rabies virus can be identified. These new rabies viruses will also be tested and protocols developed for assaying neural circuits in a broad range of relevant structures. Overall, this project will result in the generation and validation of very valuable new tools which will then be available to the neuroscience research community.

Public Health Relevance

Understanding neural circuits with increasingly sophisticated and higher resolution tools is crucial to understanding diseases that are caused by neural circuit disorders, including Parkinson's, neuromuscular disorders, paralysis, schizophrenia, depression, autism and attention disorders, among many others. The development of new tools for revealing circuits will therefore have a large impact on these diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
High Impact Research and Research Infrastructure Programs (RC2)
Project #
5RC2NS069464-02
Application #
7938601
Study Section
Special Emphasis Panel (ZNS1-SRB-E (32))
Program Officer
Chen, Daofen
Project Start
2009-09-30
Project End
2012-08-31
Budget Start
2010-09-01
Budget End
2012-08-31
Support Year
2
Fiscal Year
2010
Total Cost
$1,420,167
Indirect Cost
Name
Salk Institute for Biological Studies
Department
Type
DUNS #
078731668
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Rowland, David C; Weible, Aldis P; Wickersham, Ian R et al. (2013) Transgenically targeted rabies virus demonstrates a major monosynaptic projection from hippocampal area CA2 to medial entorhinal layer II neurons. J Neurosci 33:14889-98
Osakada, Fumitaka; Callaway, Edward M (2013) Design and generation of recombinant rabies virus vectors. Nat Protoc 8:1583-601
Marshel, James H; Garrett, Marina E; Nauhaus, Ian et al. (2011) Functional specialization of seven mouse visual cortical areas. Neuron 72:1040-54
Choi, Jiwon; Callaway, Edward M (2011) Monosynaptic inputs to ErbB4-expressing inhibitory neurons in mouse primary somatosensory cortex. J Comp Neurol 519:3402-14
Osakada, Fumitaka; Mori, Takuma; Cetin, Ali H et al. (2011) New rabies virus variants for monitoring and manipulating activity and gene expression in defined neural circuits. Neuron 71:617-31
Weible, Aldis P; Schwarcz, Leslie; Wickersham, Ian R et al. (2010) Transgenic targeting of recombinant rabies virus reveals monosynaptic connectivity of specific neurons. J Neurosci 30:16509-13
Wall, Nicholas R; Wickersham, Ian R; Cetin, Ali et al. (2010) Monosynaptic circuit tracing in vivo through Cre-dependent targeting and complementation of modified rabies virus. Proc Natl Acad Sci U S A 107:21848-53
Choi, Jiwon; Young, John A T; Callaway, Edward M (2010) Selective viral vector transduction of ErbB4 expressing cortical interneurons in vivo with a viral receptor-ligand bridge protein. Proc Natl Acad Sci U S A 107:16703-8
Haubensak, Wulf; Kunwar, Prabhat S; Cai, Haijiang et al. (2010) Genetic dissection of an amygdala microcircuit that gates conditioned fear. Nature 468:270-6
Marshel, James H; Mori, Takuma; Nielsen, Kristina J et al. (2010) Targeting single neuronal networks for gene expression and cell labeling in vivo. Neuron 67:562-74