The objective of this project is to acquire new knowledge about the role of the CD8 T cells in protectingagainst influenza infection. The CD8 T cell response is thought to play a pivotal role in clearinginfection and establishing protective immunity from studies in animal models. However, thequantitative and qualitative characteristics of the influenza A virus-specific CD8 T cell response tonatural infection and vaccines have not been investigated systematically in the human host. Wepropose to evaluate influenza A virus-specific CD8 T cells in child populations and adults. Experimentswill use multi-color flow cytometry-based techniques which overcome technical obstacles to assessingCD8 T cell immunity in human populations, including children, to characterize CD8 T cells specific forinfluenza A antigens. Prospective evaluations will be done in all age cohorts who are immunized withinactivated or live attenuated influenza vaccines and in children with natural influenza A infection.
The Specific Aims are: 1. To characterize the influenza A-specific CD8 T cell response before and afteradministration of inactivated influenza vaccine or live attenuated influenza vaccine to children, youngadults, and older adults. We hypothesize that immunization will induce effector and memory CD8 T cellresponses at different time points, as characterized by specific patterns of multiple phenotypes and Tcell functions. We expect responses to differ by vaccine type, and age. 2. To characterize the number,phenotype and functions of influenza A virus-specific effector and memory CD8 T cells in children withacute influenza. To evaluate antiviral CD8 T cell responses in children allows study of the primary CD8T cell response in naTve exposed, subjects. We hypothesize that CD8 T cell responses induced bynatural infection will resemble responses to live vaccine. This project is a component of our coordinatedefforts addressing T cell and B cell responses as well as natural killer responses to influenza A usingthe same cohort of human subjects and will provide new information on the CD8 T cell immunity in thecontext of the overall host responses to influenza A. This information will be critical for providingenhanced protection during a potential influenza A pandemic while it is naturally occurring or abioterrorist event.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Program--Cooperative Agreements (U19)
Project #
3U19AI057229-05S1
Application #
7657178
Study Section
Special Emphasis Panel (ZAI1-PTM-I (M4))
Project Start
2008-04-01
Project End
2009-03-31
Budget Start
2008-04-01
Budget End
2009-03-31
Support Year
5
Fiscal Year
2008
Total Cost
$161,900
Indirect Cost
Name
Stanford University
Department
Type
DUNS #
009214214
City
Stanford
State
CA
Country
United States
Zip Code
94305
Vallania, Francesco; Tam, Andrew; Lofgren, Shane et al. (2018) Leveraging heterogeneity across multiple datasets increases cell-mixture deconvolution accuracy and reduces biological and technical biases. Nat Commun 9:4735
Bongen, Erika; Vallania, Francesco; Utz, Paul J et al. (2018) KLRD1-expressing natural killer cells predict influenza susceptibility. Genome Med 10:45
Sweeney, Timothy E; Azad, Tej D; Donato, Michele et al. (2018) Unsupervised Analysis of Transcriptomics in Bacterial Sepsis Across Multiple Datasets Reveals Three Robust Clusters. Crit Care Med 46:915-925
Lin, Dongxia; Maecker, Holden T (2018) Mass Cytometry Assays for Antigen-Specific T Cells Using CyTOF. Methods Mol Biol 1678:37-47
Goltsev, Yury; Samusik, Nikolay; Kennedy-Darling, Julia et al. (2018) Deep Profiling of Mouse Splenic Architecture with CODEX Multiplexed Imaging. Cell 174:968-981.e15
Gee, Marvin H; Sibener, Leah V; Birnbaum, Michael E et al. (2018) Stress-testing the relationship between T cell receptor/peptide-MHC affinity and cross-reactivity using peptide velcro. Proc Natl Acad Sci U S A 115:E7369-E7378
Cheung, Peggie; Vallania, Francesco; Warsinske, Hayley C et al. (2018) Single-Cell Chromatin Modification Profiling Reveals Increased Epigenetic Variations with Aging. Cell 173:1385-1397.e14
Mamedov, Murad R; Scholzen, Anja; Nair, Ramesh V et al. (2018) A Macrophage Colony-Stimulating-Factor-Producing ?? T Cell Subset Prevents Malarial Parasitemic Recurrence. Immunity 48:350-363.e7
Kooreman, Nigel G; Kim, Youngkyun; de Almeida, Patricia E et al. (2018) Autologous iPSC-Based Vaccines Elicit Anti-tumor Responses In Vivo. Cell Stem Cell 22:501-513.e7
Haynes, Winston A; Tomczak, Aurelie; Khatri, Purvesh (2018) Gene annotation bias impedes biomedical research. Sci Rep 8:1362

Showing the most recent 10 out of 249 publications