This pilot project proposes to implement and evaluate a scalable digital patient engagement strategy intended to recruit participants to the All of Us program (AoU) and harness the vast amount of electronic health record (EHR) information available at Washington University and BJC Healthcare (WU-BJC) for precision-medicine research. To accelerate complex genetic discovery and translation, we believe it is critical to harness existing data quickly and efficiently and to engage research participants via digital mechanisms. Our project provides a prototype digital precision medicine research paradigm to increase public interest in ?citizen science? and participation in AoU. By integrating digital recruitment mechanisms and EHR-based phenotyping, we can rapidly engage, recruit, and phenotype new AoU participants in a cost-effective and timely manner. Our approach is generalizable, adaptable, and ultimately allows for the linkage of genomic data with EHR- derived phenotypes to accelerate biomedical research. We will test this approach in the WU-BJC system, Missouri's largest patient care provider (> 2 million individuals annually). We will recruit active patients for AoU, support and enable their consent, and extract and submit their EHR-derived phenotyping data to AoU. WU-BJC uses a common, cloud-hosted EHR (Epic), with ensuing clinical data available for research purposes via extraction and harmonization processes that populate an OMOP CDM 5.2 data repository (Research Data Core). By recruiting patients via our shared EHR (specifically, via the integrated patient portal, MyChart), we will quickly and efficiently create a cohort with associated and well populated clinical data sets, all with minimal costs and participant burden. This forward-thinking ?direct-to-participant? model can also be implemented to add new online assessments and rapid data updates compared to ?traditional? in-person or pre-scheduled approaches. Based on our preliminary studies, we anticipate a majority of eligible individuals will agree to participate in our study, to future use of their data, and to future contact. This approach will enable researchers to effectively target emerging health trends and research needs quickly and efficiently. We will: (1) establish a digital, community-focused patient engagement, recruitment, and consent strategy, targeting a combination of under-represented minority, rural, and medically underserved populations in the areas served by WU-BJC; (2) implement a phenotyping pipeline to extract, harmonize, and submit clinical data to AoU; and (3) evaluate and optimize strategies to recruit a representative sample of participants. We will implement a digital, direct-to-participant engagement, recruitment, and consent strategy for AoU participation. We will demonstrate the feasibility of rapidly and inexpensively creating computable participant phenotypes, extracted from our EHR platforms. We will evaluate and demonstrate the value of this approach to identify opportunities for optimization and further implementation in analogous settings. Our protocols and tools will be made available, adhering to FAIR (Findability, Accessibility, Interoperability, & Reusability) principles.

Public Health Relevance

We will implement a digital, direct-to-participant engagement, recruitment, and consent strategy, which will serve to engage such participants in the All of Us initiative. We will demonstrate the feasibility of rapidly and inexpensively creating computable phenotypes for AoU participants, extracted from our EHR platforms and ?downstream? research data warehousing system, and evaluate and demonstrate the value of this approach in order to identify opportunities for optimization and further implementation. Our protocols, tools, and lessons learned will be made available for dissemination to the All of Us community as well as the broader NIH clinical and translational research community, adhering to FAIR (Findability, Accessibility, Interoperability, and Reusability) principles.

Agency
National Institute of Health (NIH)
Institute
National Center for Advancing Translational Sciences (NCATS)
Type
Linked Specialized Center Cooperative Agreement (UL1)
Project #
3UL1TR002345-04S3
Application #
10217859
Study Section
Program Officer
Gannot, Gallya
Project Start
2017-06-19
Project End
2022-02-28
Budget Start
2020-09-01
Budget End
2021-02-28
Support Year
4
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Washington University
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
068552207
City
Saint Louis
State
MO
Country
United States
Zip Code
63130
Hamvas, Aaron; Feng, Rui; Bi, Yingtao et al. (2018) Exome sequencing identifies gene variants and networks associated with extreme respiratory outcomes following preterm birth. BMC Genet 19:94
Potter, Robert F; D'Souza, Alaric W; Wallace, Meghan A et al. (2018) Superficieibacter electus gen. nov., sp. nov., an Extended-Spectrum ?-Lactamase Possessing Member of the Enterobacteriaceae Family, Isolated From Intensive Care Unit Surfaces. Front Microbiol 9:1629
Rusconi, B; Jiang, X; Sidhu, R et al. (2018) Gut Sphingolipid Composition as a Prelude to Necrotizing Enterocolitis. Sci Rep 8:10984
Jones, Kai E; Yan, Yan; Colditz, Graham A et al. (2018) Prenatal counseling on type 2 diabetes risk, exercise, and nutrition affects the likelihood of postpartum diabetes screening after gestational diabetes. J Perinatol 38:315-323
Wildburger, Norelle C; Gyngard, Frank; Guillermier, Christelle et al. (2018) Amyloid-? Plaques in Clinical Alzheimer's Disease Brain Incorporate Stable Isotope Tracer In Vivo and Exhibit Nanoscale Heterogeneity. Front Neurol 9:169
Matthews, Lillian G; Walsh, Brian H; Knutsen, Clare et al. (2018) Brain growth in the NICU: critical periods of tissue-specific expansion. Pediatr Res 83:976-981
Brado, Dominik; Obasa, Adetayo Emmanuel; Ikomey, George Mondinde et al. (2018) Analyses of HIV-1 integrase sequences prior to South African national HIV-treatment program and available of integrase inhibitors in Cape Town, South Africa. Sci Rep 8:4709
Semenkovich, Tara R; Olsen, Margaret A; Puri, Varun et al. (2018) Current State of Empyema Management. Ann Thorac Surg 105:1589-1596
Parrish, Katelyn L; Hogan, Patrick G; Clemons 2nd, Arvon A et al. (2018) Spatial relationships among public places frequented by families plagued by methicillin-resistant Staphylococcus aureus. BMC Res Notes 11:692
Garbutt, Jane M; Dodd, Sherry; Walling, Emily et al. (2018) Barriers and facilitators to HPV vaccination in primary care practices: a mixed methods study using the Consolidated Framework for Implementation Research. BMC Fam Pract 19:53

Showing the most recent 10 out of 416 publications